Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NSQ25_RS05500 Genome accession   NZ_CP151982
Coordinates   1102034..1102231 (+) Length   65 a.a.
NCBI ID   WP_034282083.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0512     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1097034..1107231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ25_RS05470 (NSQ25_05470) - 1097453..1097632 (+) 180 WP_008348517.1 YjzC family protein -
  NSQ25_RS05475 (NSQ25_05475) - 1097796..1099061 (+) 1266 WP_041117120.1 MFS transporter -
  NSQ25_RS05480 (NSQ25_05480) - 1099174..1099368 (-) 195 WP_003211779.1 YjzD family protein -
  NSQ25_RS05485 (NSQ25_05485) - 1099581..1100321 (+) 741 WP_024425057.1 hypothetical protein -
  NSQ25_RS05490 (NSQ25_05490) - 1100395..1100970 (+) 576 WP_268421564.1 nad binding enzyme -
  NSQ25_RS05495 (NSQ25_05495) med 1101062..1102024 (+) 963 WP_326136664.1 BMP family ABC transporter substrate-binding protein Regulator
  NSQ25_RS05500 (NSQ25_05500) comZ 1102034..1102231 (+) 198 WP_034282083.1 ComZ family protein Regulator
  NSQ25_RS05505 (NSQ25_05505) - 1102241..1102474 (-) 234 WP_034282082.1 hypothetical protein -
  NSQ25_RS05510 (NSQ25_05510) - 1102646..1103584 (+) 939 WP_034282079.1 beta-ketoacyl-ACP synthase III -
  NSQ25_RS05515 (NSQ25_05515) fabF 1103606..1104847 (+) 1242 WP_034282078.1 beta-ketoacyl-ACP synthase II -
  NSQ25_RS05520 (NSQ25_05520) - 1104925..1105728 (+) 804 WP_326136585.1 DUF2268 domain-containing protein -
  NSQ25_RS05525 (NSQ25_05525) - 1105878..1106858 (+) 981 WP_061109669.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1509

>NTDB_id=983295 NSQ25_RS05500 WP_034282083.1 1102034..1102231(+) (comZ) [Bacillus sp. FSL R5-0512]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=983295 NSQ25_RS05500 WP_034282083.1 1102034..1102231(+) (comZ) [Bacillus sp. FSL R5-0512]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGACCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment