Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSU11_RS05270 Genome accession   NZ_CP151981
Coordinates   1081466..1082416 (+) Length   316 a.a.
NCBI ID   WP_149125796.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0712     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1076466..1087416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU11_RS05245 (NSU11_05245) - 1077955..1078815 (+) 861 WP_024425480.1 SDR family oxidoreductase -
  NSU11_RS05250 (NSU11_05250) - 1078872..1079108 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  NSU11_RS05255 (NSU11_05255) comK 1079398..1079976 (+) 579 WP_024425481.1 competence protein ComK Regulator
  NSU11_RS05260 (NSU11_05260) - 1080276..1080758 (+) 483 WP_151039250.1 hypothetical protein -
  NSU11_RS05265 (NSU11_05265) - 1081025..1081303 (+) 279 WP_342493901.1 barstar family protein -
  NSU11_RS05270 (NSU11_05270) ceuB 1081466..1082416 (+) 951 WP_149125796.1 ABC transporter permease Machinery gene
  NSU11_RS05275 (NSU11_05275) - 1082409..1083359 (+) 951 WP_024425487.1 iron chelate uptake ABC transporter family permease subunit -
  NSU11_RS05280 (NSU11_05280) - 1083350..1084108 (+) 759 WP_024425488.1 ATP-binding cassette domain-containing protein -
  NSU11_RS05285 (NSU11_05285) - 1084130..1085074 (+) 945 WP_120207354.1 siderophore ABC transporter substrate-binding protein -
  NSU11_RS05290 (NSU11_05290) - 1085213..1086166 (+) 954 WP_024425490.1 LCP family protein -
  NSU11_RS05295 (NSU11_05295) - 1086238..1086600 (-) 363 WP_024425491.1 hypothetical protein -
  NSU11_RS05300 (NSU11_05300) - 1086758..1087375 (+) 618 WP_342493827.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34957.31 Da        Isoelectric Point: 9.7475

>NTDB_id=983230 NSU11_RS05270 WP_149125796.1 1081466..1082416(+) (ceuB) [Bacillus sp. FSL R5-0712]
MKLYQLSLFFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTQANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=983230 NSU11_RS05270 WP_149125796.1 1081466..1082416(+) (ceuB) [Bacillus sp. FSL R5-0712]
ATGAAATTGTATCAATTAAGTTTGTTTTTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTTGTGAGTATTGTAC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACAAGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGAGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCCGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGGTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTTGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.955

99.367

0.506

Multiple sequence alignment