Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NST32_RS11730 | Genome accession | NZ_CP151978 |
| Coordinates | 2272686..2273021 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL L8-0215 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2267686..2278021
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST32_RS11710 (NST32_11710) | gcvT | 2268160..2269260 (-) | 1101 | WP_340900162.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NST32_RS11715 (NST32_11715) | - | 2269822..2271492 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| NST32_RS11720 (NST32_11720) | - | 2271507..2272304 (+) | 798 | WP_342474508.1 | YqhG family protein | - |
| NST32_RS11725 (NST32_11725) | - | 2272488..2272652 (+) | 165 | WP_217008802.1 | anti-repressor SinI family protein | - |
| NST32_RS11730 (NST32_11730) | sinR | 2272686..2273021 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| NST32_RS11735 (NST32_11735) | - | 2273089..2273889 (-) | 801 | WP_034280222.1 | TasA family protein | - |
| NST32_RS11740 (NST32_11740) | - | 2273947..2274519 (-) | 573 | WP_034280218.1 | signal peptidase I | - |
| NST32_RS11745 (NST32_11745) | tapA | 2274572..2275099 (-) | 528 | WP_061109347.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NST32_RS11750 (NST32_11750) | - | 2275399..2275677 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| NST32_RS11755 (NST32_11755) | - | 2275712..2275906 (-) | 195 | WP_046311750.1 | YqzE family protein | - |
| NST32_RS11760 (NST32_11760) | comGG | 2275966..2276349 (-) | 384 | WP_041117969.1 | competence type IV pilus minor pilin ComGG | - |
| NST32_RS11765 (NST32_11765) | comGF | 2276346..2276873 (-) | 528 | WP_259407219.1 | competence type IV pilus minor pilin ComGF | - |
| NST32_RS11770 (NST32_11770) | comGE | 2276785..2277099 (-) | 315 | WP_041106865.1 | competence type IV pilus minor pilin ComGE | - |
| NST32_RS11775 (NST32_11775) | comGD | 2277083..2277529 (-) | 447 | WP_046311754.1 | competence type IV pilus minor pilin ComGD | - |
| NST32_RS11780 (NST32_11780) | comGC | 2277522..2277815 (-) | 294 | WP_061109348.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=983094 NST32_RS11730 WP_024422969.1 2272686..2273021(+) (sinR) [Bacillus sp. FSL L8-0215]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=983094 NST32_RS11730 WP_024422969.1 2272686..2273021(+) (sinR) [Bacillus sp. FSL L8-0215]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |