Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   NST32_RS05820 Genome accession   NZ_CP151978
Coordinates   1139591..1140553 (+) Length   320 a.a.
NCBI ID   WP_024425055.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0215     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1134591..1145553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST32_RS05790 (NST32_05790) argF 1134929..1135879 (+) 951 WP_061109666.1 ornithine carbamoyltransferase -
  NST32_RS05795 (NST32_05795) - 1135982..1136161 (+) 180 WP_008348517.1 YjzC family protein -
  NST32_RS05800 (NST32_05800) - 1136325..1137590 (+) 1266 WP_041117120.1 MFS transporter -
  NST32_RS05805 (NST32_05805) - 1137703..1137897 (-) 195 WP_003211779.1 YjzD family protein -
  NST32_RS05810 (NST32_05810) - 1138110..1138850 (+) 741 WP_024425057.1 hypothetical protein -
  NST32_RS05815 (NST32_05815) - 1138924..1139499 (+) 576 WP_024426490.1 hypothetical protein -
  NST32_RS05820 (NST32_05820) med 1139591..1140553 (+) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  NST32_RS05825 (NST32_05825) comZ 1140566..1140763 (+) 198 WP_034282083.1 ComZ family protein Regulator
  NST32_RS05830 (NST32_05830) - 1140773..1141006 (-) 234 WP_034282082.1 hypothetical protein -
  NST32_RS05835 (NST32_05835) - 1141178..1142116 (+) 939 WP_034282079.1 beta-ketoacyl-ACP synthase III -
  NST32_RS05840 (NST32_05840) fabF 1142138..1143379 (+) 1242 WP_034282078.1 beta-ketoacyl-ACP synthase II -
  NST32_RS05845 (NST32_05845) - 1143457..1144260 (+) 804 WP_176967524.1 DUF2268 domain-containing protein -
  NST32_RS05850 (NST32_05850) - 1144410..1145390 (+) 981 WP_268421562.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 320 a.a.        Molecular weight: 35639.48 Da        Isoelectric Point: 5.0003

>NTDB_id=983075 NST32_RS05820 WP_024425055.1 1139591..1140553(+) (med) [Bacillus sp. FSL L8-0215]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=983075 NST32_RS05820 WP_024425055.1 1139591..1140553(+) (med) [Bacillus sp. FSL L8-0215]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCTGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCTTACAAAAAAACAGGTAAACTGCCAAATGAAAAG
TGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.537

97.813

0.631


Multiple sequence alignment