Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   ACN20J_RS17045 Genome accession   NZ_CP183383
Coordinates   3860776..3862704 (+) Length   642 a.a.
NCBI ID   WP_189837989.1    Uniprot ID   -
Organism   Streptomyces sp. 2-1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 3855776..3867704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN20J_RS17030 (ACN20J_17025) - 3857049..3857357 (+) 309 WP_055615009.1 YtxH domain-containing protein -
  ACN20J_RS17035 (ACN20J_17030) - 3857421..3858875 (+) 1455 WP_189837991.1 FGGY family carbohydrate kinase -
  ACN20J_RS17040 (ACN20J_17035) rcrP 3859043..3860776 (+) 1734 WP_189837990.1 ABC transporter ATP-binding protein Regulator
  ACN20J_RS17045 (ACN20J_17040) rcrQ 3860776..3862704 (+) 1929 WP_189837989.1 ABC transporter ATP-binding protein Regulator
  ACN20J_RS17050 (ACN20J_17045) - 3862935..3864230 (-) 1296 WP_189837988.1 RNA polymerase sigma factor -
  ACN20J_RS17055 (ACN20J_17050) - 3864369..3865070 (+) 702 WP_189837987.1 hypothetical protein -
  ACN20J_RS17060 (ACN20J_17055) - 3865067..3866089 (+) 1023 WP_189837986.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -

Sequence


Protein


Download         Length: 642 a.a.        Molecular weight: 69399.74 Da        Isoelectric Point: 5.3120

>NTDB_id=983074 ACN20J_RS17045 WP_189837989.1 3860776..3862704(+) (rcrQ) [Streptomyces sp. 2-1]
MAGPMGRMMAGTGPDHHSMDFKGSGKRLLSHFKPERTTLYVMLVAVVFSVGLSVLGPKILGKATDLVFAGVVGREMPAGQ
TKAEALAAMRERGDGGMADMLSGTDFTPGEGIDFGAVGEVLGLALAAFLVAGLLMTVATRLVNRAVNKTMYNMREDVQTK
LSRLPLSYFDKRQRGEVLSRATNDIDNIGQTLQQSMGQLVNSLLTIVGVLAMMFWVSWLLALVALVTVPLSFFVATRVGK
RSQPHFVQQWRTTGKLNAHIEEMYTGHNLVKVFGRQDESAAQFAEENEKLYEAGFRAQFNSGVMQPLMMFVSNLNYVLVA
VVGGLRVASGALSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERIFELLDAEEQEADPVTGARPDELRGRVALE
GVSFRYDPEKPLIEDLSLKVEPGHTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVDIAKMSRDELRAGIGMVLQDT
WLFGGTIAENIAYGASREVTRGEIEEAARAAHADRFVRTLPDGYDTVIDDEGSGVSAGEKQLITIARAFLSDPVILVLDE
ATSSVDTRTEVLIQKAMAKLAHGRTSFVIAHRLSTIRDADTILVMENGAIVEQGAHAELLAAEGAYARLYKAQFAEAVVE
VD

Nucleotide


Download         Length: 1929 bp        

>NTDB_id=983074 ACN20J_RS17045 WP_189837989.1 3860776..3862704(+) (rcrQ) [Streptomyces sp. 2-1]
ATGGCCGGGCCCATGGGGCGGATGATGGCCGGGACGGGCCCCGACCATCACTCGATGGACTTCAAGGGGTCCGGCAAGCG
GCTCCTGTCACACTTCAAGCCGGAACGCACCACTCTGTACGTGATGCTCGTCGCCGTGGTGTTCAGCGTCGGCCTCTCGG
TCCTCGGGCCGAAGATCCTCGGCAAGGCCACCGACCTCGTCTTCGCCGGAGTCGTCGGACGGGAGATGCCCGCCGGCCAG
ACCAAGGCCGAGGCCCTCGCGGCGATGCGGGAACGCGGCGACGGCGGCATGGCCGACATGCTCTCCGGGACGGACTTCAC
CCCGGGCGAGGGCATCGACTTCGGCGCGGTCGGCGAGGTGCTGGGGCTCGCGCTCGCGGCGTTCCTGGTGGCCGGTCTGC
TGATGACCGTGGCGACGCGGCTGGTGAACCGGGCCGTCAACAAGACGATGTACAACATGCGCGAGGACGTGCAGACGAAG
CTGTCGCGGCTGCCGCTGTCGTACTTCGACAAGCGGCAGCGCGGTGAGGTGCTCAGCCGCGCCACGAACGACATCGACAA
CATCGGCCAGACCCTTCAGCAGTCGATGGGCCAGCTGGTCAACTCGCTGCTGACCATCGTCGGTGTGCTCGCGATGATGT
TCTGGGTGTCTTGGCTGCTCGCGCTCGTCGCGCTGGTCACCGTGCCGCTGTCGTTCTTCGTCGCCACCCGGGTCGGCAAG
CGGTCGCAGCCGCACTTCGTCCAGCAGTGGCGGACCACCGGCAAGCTCAACGCGCACATCGAGGAGATGTACACCGGCCA
CAACCTCGTCAAGGTCTTCGGCCGGCAGGACGAGTCGGCGGCACAGTTCGCCGAGGAGAACGAGAAGCTGTACGAGGCCG
GGTTCCGGGCGCAGTTCAACAGCGGGGTCATGCAGCCGCTGATGATGTTCGTGTCGAACCTGAACTATGTGCTGGTGGCC
GTGGTCGGCGGTCTGCGTGTCGCCTCGGGCGCCCTCTCGATCGGTGACGTCCAGGCCTTCATCCAGTACTCCCGGCAGTT
CTCCATGCCGCTCACCCAGGTCGCCTCCATGGCGAACCTCGTGCAGTCCGGGGTCGCCTCGGCCGAGCGGATCTTCGAAC
TGCTGGACGCGGAGGAGCAGGAGGCGGACCCGGTGACGGGCGCGCGTCCGGACGAACTCCGGGGCCGGGTGGCGCTGGAG
GGGGTCTCCTTCCGGTACGACCCGGAGAAGCCCCTCATCGAGGACCTGTCGCTGAAGGTGGAGCCGGGGCACACGGTCGC
GATCGTCGGCCCGACGGGCGCCGGCAAGACGACCCTGGTCAACCTGTTGATGCGGTTCTACGAGGTCACGGGCGGCCGTA
TCACCCTCGACGGGGTCGACATCGCGAAGATGTCCCGGGACGAACTGCGGGCCGGGATCGGCATGGTGCTGCAGGACACC
TGGCTGTTCGGCGGGACGATCGCGGAGAACATCGCGTACGGGGCTTCGCGTGAGGTCACGCGTGGAGAGATCGAGGAGGC
GGCTCGGGCCGCCCATGCCGACCGGTTCGTCCGGACGTTGCCCGACGGGTACGACACCGTCATCGACGACGAGGGGTCGG
GGGTGAGCGCCGGTGAGAAGCAGCTCATCACCATCGCTCGGGCGTTCCTGTCCGATCCGGTGATTCTGGTGCTGGACGAG
GCGACGAGTTCGGTCGACACCCGTACCGAGGTGCTCATCCAGAAGGCGATGGCGAAGCTCGCGCACGGGCGGACGTCGTT
CGTCATCGCGCATCGTCTGTCGACGATCCGGGACGCGGACACGATCCTCGTGATGGAGAACGGGGCGATCGTGGAGCAGG
GTGCGCACGCGGAGCTGCTGGCGGCGGAGGGGGCGTACGCCCGGCTTTACAAGGCCCAGTTCGCGGAGGCCGTGGTGGAG
GTGGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

40.615

96.262

0.391


Multiple sequence alignment