Detailed information NTG0983025

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACN2BR_RS22380
• Genome accession: NZ_CP183338
• Coordinates: 4599527..4600552 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC6030
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4594527..4605552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN2BR_RS22370 (ACN2BR_22370)	rpmE	4596758..4596970 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACN2BR_RS22375 (ACN2BR_22375)	priA	4597173..4599371 (+)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
ACN2BR_RS22380 (ACN2BR_22380)	cytR	4599527..4600552 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACN2BR_RS22385 (ACN2BR_22385)	ftsN	4600644..4601603 (+)	960	WP_000068837.1	cell division protein FtsN	-
ACN2BR_RS22390 (ACN2BR_22390)	hslV	4601696..4602226 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACN2BR_RS22395 (ACN2BR_22395)	hslU	4602236..4603567 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACN2BR_RS22400 (ACN2BR_22400)	menA	4603634..4604560 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACN2BR_RS22405 (ACN2BR_22405)	rraA	4604653..4605138 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACN2BR_RS22410 (ACN2BR_22410)	zapB	4605223..4605468 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=983025 ACN2BR_RS22380 WP_000644904.1 4599527..4600552(+) (cytR) [Escherichia coli strain EC6030]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=983025 ACN2BR_RS22380 WP_000644904.1 4599527..4600552(+) (cytR) [Escherichia coli strain EC6030]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628