Detailed information NTG0982960

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: NSQ60_RS06630
• Genome accession: NZ_CP151976
• Coordinates: 1296587..1298689 (-)
• Length: 700 a.a.
• NCBI ID: WP_046310761.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL W8-0502
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1291587..1303689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ60_RS06605 (NSQ60_06605)	-	1292004..1292246 (+)	243	WP_024424676.1	aspartyl-phosphate phosphatase Spo0E family protein	-
NSQ60_RS06610 (NSQ60_06610)	-	1292293..1293798 (-)	1506	WP_034281538.1	ATP-binding protein	-
NSQ60_RS06615 (NSQ60_06615)	-	1294003..1294458 (+)	456	WP_034281539.1	MarR family transcriptional regulator	-
NSQ60_RS06620 (NSQ60_06620)	motB	1294652..1295422 (-)	771	WP_034281540.1	flagellar motor protein MotB	-
NSQ60_RS06625 (NSQ60_06625)	motA	1295415..1296209 (-)	795	WP_024424680.1	flagellar motor stator protein MotA	-
NSQ60_RS06630 (NSQ60_06630)	clpC	1296587..1298689 (-)	2103	WP_046310761.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
NSQ60_RS06635 (NSQ60_06635)	-	1298934..1299977 (+)	1044	WP_034623360.1	membrane protein	-
NSQ60_RS06640 (NSQ60_06640)	queC	1300253..1300909 (+)	657	WP_046310763.1	7-cyano-7-deazaguanine synthase QueC	-
NSQ60_RS06645 (NSQ60_06645)	queD	1300910..1301350 (+)	441	WP_034281544.1	6-carboxytetrahydropterin synthase QueD	-
NSQ60_RS06650 (NSQ60_06650)	queE	1301343..1302074 (+)	732	WP_034281545.1	7-carboxy-7-deazaguanine synthase QueE	-
NSQ60_RS06655 (NSQ60_06655)	queF	1302090..1302587 (+)	498	WP_024426839.1	preQ(1) synthase	-
NSQ60_RS06660 (NSQ60_06660)	-	1303051..1303419 (-)	369	WP_046310766.1	winged helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 700 a.a.
• Molecular weight: 77933.52 Da
• Isoelectric Point: 5.0332

>NTDB_id=982960 NSQ60_RS06630 WP_046310761.1 1296587..1298689(-) (clpC) [Bacillus sp. FSL W8-0502]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQAASHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVSYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTEKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFESLDRDDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG

Nucleotide

• Length: 2103 bp

>NTDB_id=982960 NSQ60_RS06630 WP_046310761.1 1296587..1298689(-) (clpC) [Bacillus sp. FSL W8-0502]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTTTTTGGAGGAAGTTCAT
TCTTCTCTCAGGCAGCAAGTCATGCCCCAAACATGGAGCAGCCAAAGCAAAAAGGCTTACTCGATGAGCTTGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGAGACGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TCAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAGCTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTTATCGTAGATGAGCCAACACAAGATGAAGCAATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCCTATCATGGTGTCTCCTATTCAGATGAAGCAATCAAAGCGTGCGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTGCCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAATCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAACCGACTAGCGCAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGAAAAAGAGCATATCGTTACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATTCCTGTCGGGAAACTCCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGACAGGAACATGCGGTTGATAAAGTGGCGAAAGCCGTGAAAAG
AAGCAGAGCTGGTTTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATGTTCCTGCAAA
TCATGGAAGATGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAGGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTCACTAAGCAGCTACTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAGTTTGAATCATTAGACAGAGATG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATCCAAGA
GCACGTTGAAGACCAAATGACGGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (253-353)

• AAA domain (Cdc48 subfamily) (AAA_2) (437-604)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (610-687)

• ATPase family associated with various cellular activities (AAA) (AAA) (116-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Lactococcus lactis subsp. cremoris KW2	56.64	100	0.597
clpE	Streptococcus mutans UA159	56.334	100	0.597
clpE	Streptococcus pneumoniae Rx1	55.525	100	0.574
clpE	Streptococcus pneumoniae D39	55.525	100	0.574
clpE	Streptococcus pneumoniae R6	55.525	100	0.574
clpE	Streptococcus pneumoniae TIGR4	55.525	100	0.574
clpC	Bacillus subtilis subsp. subtilis str. 168	53.731	95.714	0.514
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	47.327	90.857	0.43
clpC	Streptococcus thermophilus LMD-9	45.975	92.286	0.424
clpC	Streptococcus thermophilus LMG 18311	45.82	92.286	0.423
clpC	Streptococcus pneumoniae TIGR4	44.513	92.429	0.411
clpC	Streptococcus pneumoniae Rx1	44.704	91.714	0.41
clpC	Streptococcus pneumoniae D39	44.704	91.714	0.41
clpC	Streptococcus mutans UA159	44.15	91.571	0.404