Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NSS65_RS15270 Genome accession   NZ_CP151970
Coordinates   2911095..2913407 (-) Length   770 a.a.
NCBI ID   WP_034282568.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1006     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2906095..2918407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS65_RS15230 (NSS65_15230) - 2906499..2906930 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  NSS65_RS15235 (NSS65_15235) - 2906930..2907271 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  NSS65_RS15240 (NSS65_15240) - 2907264..2908742 (+) 1479 WP_070325967.1 Na+/H+ antiporter subunit D -
  NSS65_RS15245 (NSS65_15245) - 2908749..2909228 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  NSS65_RS15250 (NSS65_15250) - 2909228..2909509 (+) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  NSS65_RS15255 (NSS65_15255) mnhG 2909493..2909867 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  NSS65_RS15260 (NSS65_15260) - 2909960..2910349 (-) 390 WP_034282564.1 hotdog fold thioesterase -
  NSS65_RS15265 (NSS65_15265) comA 2910373..2911014 (-) 642 WP_034282566.1 response regulator transcription factor Regulator
  NSS65_RS15270 (NSS65_15270) comP 2911095..2913407 (-) 2313 WP_034282568.1 ATP-binding protein Regulator
  NSS65_RS15275 (NSS65_15275) comX 2913461..2913631 (-) 171 WP_073207246.1 competence pheromone ComX -
  NSS65_RS15280 (NSS65_15280) - 2913628..2914542 (-) 915 WP_176967247.1 polyprenyl synthetase family protein -
  NSS65_RS15285 (NSS65_15285) degQ 2914694..2914834 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NSS65_RS15290 (NSS65_15290) - 2915340..2915696 (+) 357 WP_041115816.1 hypothetical protein -
  NSS65_RS15295 (NSS65_15295) - 2915732..2916958 (-) 1227 WP_024423326.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89564.20 Da        Isoelectric Point: 7.4929

>NTDB_id=982665 NSS65_RS15270 WP_034282568.1 2911095..2913407(-) (comP) [Bacillus sp. FSL K6-1006]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEAQRKSAFLLVVFLLTICIGY
LSAGTSGIGERFSHYVIVFCLSSVFIFYIHFIYQYFKEFDLHITTQKTIRFLYSLPIINLVIELFVPIDSALARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFLAITPTVFVVVTFYILQKPEDLKYTLKLALITYTLMLAVFYFKEILDFRFRLKRFSEKY
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKI
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNDQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKATQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=982665 NSS65_RS15270 WP_034282568.1 2911095..2913407(-) (comP) [Bacillus sp. FSL K6-1006]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGCCAAGAGAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATTTGTTTATTTTGTATCTTCTTTA
TCATTCGAATTAACAAAGAGGCTCAACGAAAATCAGCATTTCTTTTAGTTGTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCAGGTATTGGTGAGAGATTTAGCCATTATGTGATCGTATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCACTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATTACGACTCAAAAAACGATTCGCTTTTTATATA
GTCTTCCTATAATTAATCTAGTAATAGAGTTATTTGTTCCAATTGATTCGGCGTTAGCCAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATCATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATAAACATCATAGCATTTTGTCCATTTATCTTTTTGTTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTGGTAGATCCCTTTTTCTTAACTTCTTTTGTCTTGCTCATTCCTTTTTCACTCGTGTATCAA
TTTATGACGAACAAGCTTTACAATATGGATTTTTTGATAAGCAGACTGAAATACTATGGGTTTCTTGCCATTACACCGAC
CGTTTTTGTTGTTGTCACGTTTTACATTCTGCAAAAGCCAGAAGATTTGAAGTACACACTGAAGCTCGCATTAATCACCT
ATACACTCATGCTGGCTGTATTCTATTTCAAAGAAATTCTAGATTTCCGCTTCCGTCTGAAGCGTTTTTCAGAAAAGTAT
AATTACCAAGACAGCGTGTTTAAATTTACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTAGTTGTGAATAAAGCCTTTGTGCTTGAGGTGAAGGCTGATGGACAAATTATTGAAATTG
ATGAGTCAACAAATGATAGTAAGCTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGTAAAATC
ATCGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAGCGGGGCGGTCACTCGTTTATGATTTGCTGCTTATCCAATAT
ACAGACACCGAAATTGACCCGCGATGAAATCTCATGGCTGAAAACATTGGCCTTTTATACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATCGAAGAATTGATGGAGCACCTTGACGATTTGAAACAGCGCGAGGCCAATCCTGCCTGGCTGAAGAAAATC
ATGTTTGCTATGGAAGAAAAGCAGCGTTCAGATTTAGCGAGAGATCTTCATGATTCCGTGCTGCAGGACTTGATATCACT
AAAAAGGCAGTCGGAGATGTTTTTAACGAATTTCCAAAACAACCAATGCCCGACATCTATTGAAAATTCGCTTATCTCAT
GGAATGATCAAATGTCCAAAGTGATTCAAACGACGAGAGAAACGTGTCATGAGCTTCGGCCGCAGCTGCTGTATGATTTA
GGTTTAGTAAAGGCGATATCGAAGCTGACTTCTCAAATCCAGGAGGAAGCACCGTTTCATATTAGGCTGAATACGACACG
CTTTGATAAAGAATTGGACATTGATATTGATTCACAGCTGAATATTTACAGAATTGTTCAGGAACTGTTATCCAACGCCC
TGAAGCATTCAAAAGCCACTCAAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGAT
GGAGTCGGTTTTGATGCCAGTCATCTTGATCAGCACACAATGAGCATGGGTCTGTCGGGAATTAGAGAAAGAGTGAAAGC
GTTAAATGGAAAGCTTCAAATTCACACAGCCCCGGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.774

100

0.491


Multiple sequence alignment