Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | NST62_RS05475 | Genome accession | NZ_CP151968 |
| Coordinates | 1122804..1123109 (+) | Length | 101 a.a. |
| NCBI ID | WP_141600823.1 | Uniprot ID | A0A540V6B0 |
| Organism | Ureibacillus sp. FSL K6-8385 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1117804..1128109
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST62_RS05445 (NST62_05445) | - | 1118327..1118503 (-) | 177 | WP_141600829.1 | DUF2759 domain-containing protein | - |
| NST62_RS05450 (NST62_05450) | - | 1118708..1119346 (+) | 639 | WP_141600828.1 | MBL fold metallo-hydrolase | - |
| NST62_RS05455 (NST62_05455) | - | 1119410..1119652 (-) | 243 | WP_141600827.1 | DUF2626 family protein | - |
| NST62_RS05460 (NST62_05460) | - | 1119768..1120469 (-) | 702 | WP_141600826.1 | helix-turn-helix domain-containing protein | - |
| NST62_RS05465 (NST62_05465) | comGA | 1120734..1121741 (+) | 1008 | WP_328215456.1 | competence type IV pilus ATPase ComGA | - |
| NST62_RS05470 (NST62_05470) | comGB | 1121722..1122789 (+) | 1068 | WP_141600824.1 | competence type IV pilus assembly protein ComGB | - |
| NST62_RS05475 (NST62_05475) | comGC | 1122804..1123109 (+) | 306 | WP_141600823.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NST62_RS05480 (NST62_05480) | comGD | 1123122..1123550 (+) | 429 | WP_141600822.1 | competence type IV pilus minor pilin ComGD | - |
| NST62_RS05485 (NST62_05485) | - | 1123540..1123875 (+) | 336 | WP_141600821.1 | hypothetical protein | - |
| NST62_RS05490 (NST62_05490) | comGF | 1123824..1124276 (+) | 453 | WP_141600820.1 | competence type IV pilus minor pilin ComGF | - |
| NST62_RS05495 (NST62_05495) | - | 1124465..1124977 (+) | 513 | WP_342463206.1 | shikimate kinase | - |
| NST62_RS05500 (NST62_05500) | gcvT | 1125359..1126459 (+) | 1101 | WP_342463207.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NST62_RS05505 (NST62_05505) | gcvPA | 1126477..1127823 (+) | 1347 | WP_141600817.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 11351.34 Da Isoelectric Point: 7.1313
>NTDB_id=982565 NST62_RS05475 WP_141600823.1 1122804..1123109(+) (comGC) [Ureibacillus sp. FSL K6-8385]
MRNQKGFTLIEMLIVLFIISILILITVPNVTKHMNSIDDKGCEAYIKMVQGQVESYRIDHKTVPTLTQLINEGYLKENMD
KCPNGKGIAIQTDGTVTIINN
MRNQKGFTLIEMLIVLFIISILILITVPNVTKHMNSIDDKGCEAYIKMVQGQVESYRIDHKTVPTLTQLINEGYLKENMD
KCPNGKGIAIQTDGTVTIINN
Nucleotide
Download Length: 306 bp
>NTDB_id=982565 NST62_RS05475 WP_141600823.1 1122804..1123109(+) (comGC) [Ureibacillus sp. FSL K6-8385]
ATGAGAAATCAAAAAGGTTTTACGCTGATTGAGATGTTGATTGTTCTGTTTATTATTTCCATCTTGATTCTGATTACGGT
CCCTAATGTGACAAAACATATGAATTCCATCGACGATAAAGGATGCGAAGCCTATATAAAAATGGTTCAAGGCCAGGTGG
AATCTTACAGAATTGACCATAAAACGGTGCCTACTTTGACTCAATTGATTAATGAAGGTTATTTAAAAGAAAATATGGAT
AAATGTCCAAACGGAAAAGGGATTGCCATTCAGACGGACGGCACCGTGACTATCATCAATAATTAA
ATGAGAAATCAAAAAGGTTTTACGCTGATTGAGATGTTGATTGTTCTGTTTATTATTTCCATCTTGATTCTGATTACGGT
CCCTAATGTGACAAAACATATGAATTCCATCGACGATAAAGGATGCGAAGCCTATATAAAAATGGTTCAAGGCCAGGTGG
AATCTTACAGAATTGACCATAAAACGGTGCCTACTTTGACTCAATTGATTAATGAAGGTTATTTAAAAGAAAATATGGAT
AAATGTCCAAACGGAAAAGGGATTGCCATTCAGACGGACGGCACCGTGACTATCATCAATAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
55.67 |
96.04 |
0.535 |
| comGC | Staphylococcus aureus MW2 |
38.776 |
97.03 |
0.376 |
| comGC | Staphylococcus aureus N315 |
38.776 |
97.03 |
0.376 |