Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NYE49_RS02140 Genome accession   NZ_CP151962
Coordinates   417861..418811 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0358     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 412861..423811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE49_RS02115 (NYE49_02115) rapC 414319..415467 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  NYE49_RS02120 (NYE49_02120) phrC 415451..415573 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NYE49_RS02125 (NYE49_02125) - 415673..415762 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NYE49_RS02130 (NYE49_02130) - 415846..415959 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  NYE49_RS02135 (NYE49_02135) - 416112..417476 (-) 1365 WP_342410880.1 aspartate kinase -
  NYE49_RS02140 (NYE49_02140) ceuB 417861..418811 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  NYE49_RS02145 (NYE49_02145) yclO 418804..419751 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  NYE49_RS02150 (NYE49_02150) yclP 419745..420503 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  NYE49_RS02155 (NYE49_02155) yclQ 420525..421478 (+) 954 WP_063336060.1 petrobactin ABC transporter substrate-binding protein YclQ -
  NYE49_RS02160 (NYE49_02160) - 421524..422942 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=982307 NYE49_RS02140 WP_015382768.1 417861..418811(+) (ceuB) [Bacillus sp. FSL L8-0358]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=982307 NYE49_RS02140 WP_015382768.1 417861..418811(+) (ceuB) [Bacillus sp. FSL L8-0358]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAACAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GATTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTAGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment