Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MHI30_RS12880 Genome accession   NZ_CP151961
Coordinates   2577078..2577878 (-) Length   266 a.a.
NCBI ID   WP_003183361.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0528     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2572078..2582878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI30_RS12860 (MHI30_12860) - 2574031..2574285 (+) 255 WP_048350556.1 DUF2627 domain-containing protein -
  MHI30_RS12865 (MHI30_12865) - 2574396..2575121 (-) 726 WP_075752425.1 glycerophosphodiester phosphodiesterase -
  MHI30_RS12870 (MHI30_12870) - 2575257..2575877 (-) 621 WP_075752423.1 N-acetylmuramoyl-L-alanine amidase -
  MHI30_RS12875 (MHI30_12875) - 2575911..2576231 (-) 321 WP_048349989.1 membrane lipoprotein lipid attachment site-containing protein -
  MHI30_RS12880 (MHI30_12880) spo0A 2577078..2577878 (-) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  MHI30_RS12885 (MHI30_12885) spoIVB 2578168..2579418 (-) 1251 WP_252606957.1 SpoIVB peptidase -
  MHI30_RS12890 (MHI30_12890) recN 2579833..2581563 (-) 1731 WP_075752419.1 DNA repair protein RecN Machinery gene
  MHI30_RS12895 (MHI30_12895) argR 2581595..2582044 (-) 450 WP_020452129.1 transcriptional regulator ArgR -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29541.06 Da        Isoelectric Point: 6.6109

>NTDB_id=982260 MHI30_RS12880 WP_003183361.1 2577078..2577878(-) (spo0A) [Bacillus sp. FSL L8-0528]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=982260 MHI30_RS12880 WP_003183361.1 2577078..2577878(-) (spo0A) [Bacillus sp. FSL L8-0528]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGACAAAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGCCTTTCGTTGTTTAAAGACAAGGAGCCCGATGTGCTTG
TGCTGGATATTATTATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACGGCGTTCGGTCAGGAAGACGTGACGAAAAAAGCTGTAGATTTGGGCGCGTCGTATTTTATTTT
GAAGCCTTTTGACATGGAGAACTTAGTCGGCCATATCCGCCAGGTTAGCGGAAACGGGTCTCAATTGACACACCGTGCCC
CGTCCTCTCAAAGCAGTGTGCTTCGGCCGCAGCCGGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAGATCGGCGTGCCCGCTCATATAAAAGGCTATTTATACTTAAGGGAAGCCATCTCCATGGTGTATAATGACATCGA
ACTGCTAGGGAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACAACTGCAAGCCGAGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAATATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACGAATTCAGAATTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925

Multiple sequence alignment