Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   MHI30_RS02030 Genome accession   NZ_CP151961
Coordinates   381005..381403 (-) Length   132 a.a.
NCBI ID   WP_075753821.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0528     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 376005..386403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI30_RS02000 (MHI30_02000) - 376012..376173 (+) 162 WP_154495780.1 hypothetical protein -
  MHI30_RS02005 (MHI30_02005) - 376332..377015 (-) 684 WP_075753811.1 amino acid ABC transporter permease -
  MHI30_RS02010 (MHI30_02010) - 377027..377902 (-) 876 WP_075753813.1 transporter substrate-binding domain-containing protein -
  MHI30_RS02015 (MHI30_02015) - 378086..378637 (+) 552 WP_075753815.1 NAD(P)H-dependent oxidoreductase -
  MHI30_RS02020 (MHI30_02020) - 378733..379458 (+) 726 WP_075753817.1 AAA family ATPase -
  MHI30_RS02025 (MHI30_02025) - 379528..380964 (+) 1437 WP_075753819.1 family 1 glycosylhydrolase -
  MHI30_RS02030 (MHI30_02030) nin/comJ 381005..381403 (-) 399 WP_075753821.1 competence protein ComJ Regulator
  MHI30_RS02035 (MHI30_02035) nucA/comI 381421..381867 (-) 447 WP_075753823.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MHI30_RS02040 (MHI30_02040) - 382135..382338 (+) 204 WP_128814219.1 hypothetical protein -
  MHI30_RS02045 (MHI30_02045) - 382344..383147 (+) 804 WP_075753825.1 protein kinase -
  MHI30_RS02050 (MHI30_02050) - 383534..384274 (-) 741 WP_075753827.1 LXG domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15075.16 Da        Isoelectric Point: 5.1700

>NTDB_id=982229 MHI30_RS02030 WP_075753821.1 381005..381403(-) (nin/comJ) [Bacillus sp. FSL L8-0528]
MIKKWEAQEMTMSYHQFTVYQKGGKPPVMDWTDEDMKRGYTTGEHAVSFEALDNTASLVEVRLNVQEQVPSFNRRVTVSF
EVLHDGVEIASVLSKKLSCDIPQGVYQLTCYTIMPDQNSTAKITYILDFKQA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=982229 MHI30_RS02030 WP_075753821.1 381005..381403(-) (nin/comJ) [Bacillus sp. FSL L8-0528]
TTGATCAAAAAGTGGGAAGCACAAGAAATGACGATGTCATACCATCAGTTTACCGTTTATCAAAAAGGCGGAAAACCGCC
CGTTATGGATTGGACAGACGAGGATATGAAAAGAGGCTACACAACAGGAGAACACGCGGTCTCGTTTGAAGCTCTCGATA
ATACAGCATCTTTAGTAGAAGTTCGTTTGAATGTCCAGGAACAGGTTCCCTCCTTTAACAGGCGCGTCACCGTTTCTTTC
GAGGTGCTTCATGACGGGGTCGAAATTGCAAGCGTCCTATCCAAGAAATTGTCATGCGACATCCCGCAAGGCGTCTATCA
GCTGACATGCTATACGATTATGCCTGATCAAAACAGCACTGCAAAGATCACCTATATTCTCGATTTTAAACAGGCCTGA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

50

96.97

0.485

Multiple sequence alignment