Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NYE22_RS09050 | Genome accession | NZ_CP151946 |
| Coordinates | 1665180..1665515 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus sp. FSL K6-1560 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1660180..1670515
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYE22_RS09000 (NYE22_09000) | comGC | 1660199..1660495 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NYE22_RS09005 (NYE22_09005) | comGD | 1660485..1660916 (+) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NYE22_RS09010 (NYE22_09010) | comGE | 1660900..1661247 (+) | 348 | WP_063335293.1 | ComG operon protein 5 | Machinery gene |
| NYE22_RS09015 (NYE22_09015) | comGF | 1661273..1661656 (+) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| NYE22_RS09020 (NYE22_09020) | comGG | 1661657..1662031 (+) | 375 | WP_064671036.1 | ComG operon protein ComGG | Machinery gene |
| NYE22_RS09025 (NYE22_09025) | - | 1662103..1662282 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| NYE22_RS09030 (NYE22_09030) | - | 1662324..1662650 (-) | 327 | WP_021480018.1 | YqzG/YhdC family protein | - |
| NYE22_RS09035 (NYE22_09035) | tapA | 1662921..1663682 (+) | 762 | WP_064671037.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NYE22_RS09040 (NYE22_09040) | - | 1663666..1664238 (+) | 573 | WP_003246088.1 | signal peptidase I | - |
| NYE22_RS09045 (NYE22_09045) | tasA | 1664303..1665088 (+) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| NYE22_RS09050 (NYE22_09050) | sinR | 1665180..1665515 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| NYE22_RS09055 (NYE22_09055) | sinI | 1665549..1665722 (-) | 174 | WP_014477323.1 | anti-repressor SinI family protein | Regulator |
| NYE22_RS09060 (NYE22_09060) | - | 1665906..1666700 (-) | 795 | WP_032726154.1 | YqhG family protein | - |
| NYE22_RS09065 (NYE22_09065) | - | 1666721..1668394 (-) | 1674 | WP_342412457.1 | SNF2-related protein | - |
| NYE22_RS09070 (NYE22_09070) | gcvT | 1668836..1669924 (+) | 1089 | WP_342412458.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=981717 NYE22_RS09050 WP_003226345.1 1665180..1665515(-) (sinR) [Bacillus sp. FSL K6-1560]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=981717 NYE22_RS09050 WP_003226345.1 1665180..1665515(-) (sinR) [Bacillus sp. FSL K6-1560]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |