Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NYE22_RS08990 | Genome accession | NZ_CP151946 |
| Coordinates | 1658091..1659161 (+) | Length | 356 a.a. |
| NCBI ID | WP_342412456.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-1560 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1653091..1664161
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYE22_RS08955 (NYE22_08955) | - | 1653287..1653532 (-) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
| NYE22_RS08960 (NYE22_08960) | mgsR | 1653764..1654144 (+) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| NYE22_RS08970 (NYE22_08970) | rsbRD | 1654368..1655204 (+) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
| NYE22_RS08975 (NYE22_08975) | - | 1655257..1656585 (-) | 1329 | WP_161986199.1 | hemolysin family protein | - |
| NYE22_RS08980 (NYE22_08980) | corA | 1656728..1657681 (+) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| NYE22_RS08985 (NYE22_08985) | - | 1657683..1657880 (+) | 198 | WP_072173931.1 | hypothetical protein | - |
| NYE22_RS08990 (NYE22_08990) | comGA | 1658091..1659161 (+) | 1071 | WP_342412456.1 | competence protein ComGA | Machinery gene |
| NYE22_RS08995 (NYE22_08995) | comGB | 1659148..1660185 (+) | 1038 | WP_086344083.1 | comG operon protein ComGB | Machinery gene |
| NYE22_RS09000 (NYE22_09000) | comGC | 1660199..1660495 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NYE22_RS09005 (NYE22_09005) | comGD | 1660485..1660916 (+) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NYE22_RS09010 (NYE22_09010) | comGE | 1660900..1661247 (+) | 348 | WP_063335293.1 | ComG operon protein 5 | Machinery gene |
| NYE22_RS09015 (NYE22_09015) | comGF | 1661273..1661656 (+) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| NYE22_RS09020 (NYE22_09020) | comGG | 1661657..1662031 (+) | 375 | WP_064671036.1 | ComG operon protein ComGG | Machinery gene |
| NYE22_RS09025 (NYE22_09025) | - | 1662103..1662282 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| NYE22_RS09030 (NYE22_09030) | - | 1662324..1662650 (-) | 327 | WP_021480018.1 | YqzG/YhdC family protein | - |
| NYE22_RS09035 (NYE22_09035) | tapA | 1662921..1663682 (+) | 762 | WP_064671037.1 | amyloid fiber anchoring/assembly protein TapA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40428.57 Da Isoelectric Point: 8.8502
>NTDB_id=981710 NYE22_RS08990 WP_342412456.1 1658091..1659161(+) (comGA) [Bacillus sp. FSL K6-1560]
MDSIENVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTFSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIENVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTFSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=981710 NYE22_RS08990 WP_342412456.1 1658091..1659161(+) (comGA) [Bacillus sp. FSL K6-1560]
TTGGATTCAATAGAAAATGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTTTTCTGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAATGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTTTTCTGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.438 |
100 |
0.994 |
| pilB | Glaesserella parasuis strain SC1401 |
43.878 |
82.584 |
0.362 |