Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NYE22_RS05140 Genome accession   NZ_CP151946
Coordinates   961424..963721 (+) Length   765 a.a.
NCBI ID   WP_033884760.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1560     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 956424..968721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE22_RS05110 (NYE22_05110) pdeH 958019..959248 (+) 1230 WP_161986411.1 cyclic di-GMP phosphodiesterase -
  NYE22_RS05115 (NYE22_05115) - 959224..959592 (-) 369 WP_017695529.1 hypothetical protein -
  NYE22_RS05120 (NYE22_05120) - 959771..959833 (-) 63 Protein_992 hypothetical protein -
  NYE22_RS05125 (NYE22_05125) degQ 960055..960195 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  NYE22_RS05130 (NYE22_05130) - 960380..961240 (+) 861 WP_342412363.1 polyprenyl synthetase family protein -
  NYE22_RS05135 (NYE22_05135) comX 961255..961416 (+) 162 WP_003241045.1 competence pheromone ComX -
  NYE22_RS05140 (NYE22_05140) comP 961424..963721 (+) 2298 WP_033884760.1 histidine kinase Regulator
  NYE22_RS05145 (NYE22_05145) comA 963802..964446 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  NYE22_RS05150 (NYE22_05150) - 964465..964845 (+) 381 WP_014477831.1 hotdog fold thioesterase -
  NYE22_RS05155 (NYE22_05155) mnhG 964884..965258 (-) 375 WP_161986412.1 monovalent cation/H(+) antiporter subunit G -
  NYE22_RS05160 (NYE22_05160) - 965242..965526 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  NYE22_RS05165 (NYE22_05165) - 965526..966002 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  NYE22_RS05170 (NYE22_05170) - 966008..967489 (-) 1482 WP_043940184.1 Na+/H+ antiporter subunit D -
  NYE22_RS05175 (NYE22_05175) - 967482..967823 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  NYE22_RS05180 (NYE22_05180) - 967823..968254 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88434.84 Da        Isoelectric Point: 7.9091

>NTDB_id=981696 NYE22_RS05140 WP_033884760.1 961424..963721(+) (comP) [Bacillus sp. FSL K6-1560]
MKSRTNKISVLLVVISLLYVIYLTYISNNNLLVGATVSKGKNGDVVITNVDEYSMASYSGIEKGDIVKRINNQKINTKEI
KMNKLKNVSSMVVERNGKDVELKLTLFNDKNFSTYLIPLMFYIVCLFCCLFIIKINESKDLPSALVLIIFLLSASIAYIS
AGVSVKGDILCRCIMVVTLISVPLNYLLFLYHYFRELGTTLFDKKVFILYLVPIINVVCEMFRSHLFFRDYVPKLSLLSF
FFLFIIVGIYFCIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMMLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGNIKLYDAENVNSFEKVYEKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=981696 NYE22_RS05140 WP_033884760.1 961424..963721(+) (comP) [Bacillus sp. FSL K6-1560]
ATGAAGTCTAGAACCAATAAAATTTCTGTATTGTTAGTTGTAATAAGTCTGTTATATGTTATTTATTTGACCTATATAAG
CAATAATAATTTGTTAGTTGGAGCAACTGTTTCGAAAGGGAAGAACGGAGACGTTGTAATTACCAATGTAGATGAATATT
CAATGGCATCATACAGTGGAATAGAAAAAGGGGATATCGTAAAGCGTATTAATAATCAAAAGATAAACACTAAAGAAATA
AAAATGAATAAGCTTAAAAATGTGAGCTCAATGGTTGTTGAGAGAAATGGCAAGGATGTTGAGCTAAAGCTGACTTTATT
TAATGATAAAAATTTTTCTACTTACTTAATACCGTTAATGTTTTATATTGTTTGTTTATTTTGTTGCCTATTTATAATAA
AAATAAATGAATCAAAGGATTTACCATCTGCTTTAGTTTTAATTATATTTCTGTTATCCGCTTCTATTGCTTATATAAGT
GCAGGAGTTTCTGTTAAAGGCGATATACTATGCAGATGTATTATGGTGGTAACATTAATATCTGTACCGCTAAACTACCT
TCTCTTTCTTTATCATTATTTTAGAGAGTTAGGCACTACCTTATTTGATAAAAAAGTTTTCATTTTATATTTGGTACCGA
TCATAAATGTAGTGTGTGAAATGTTCCGTTCACACCTTTTCTTTCGTGATTATGTGCCTAAATTAAGTTTACTATCCTTT
TTCTTTTTATTTATCATAGTAGGGATATATTTCTGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCGCATATTAT
TAAGGTTCTCACTATTATTAATATCTTTTCTTTCTCACCTTTTTTGTGTTTATATTTGATACCGTATGTCTTTTTAAATG
CGCACTATGTTTCATCCTTTTTAGCAGCTTCATTTATGATGCTAATACCTTTCTCCTTAGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTACTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTGATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCCTGTCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAATATTAAACTATATGATGCTGAGAACG
TAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAGATAGGGAAAATCGTTGAATTTAATAAA
GGTTTTGTCATGAAGATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTAATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAG
GAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTGGTG
AAGGCGTTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGCAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTTAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATTAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTTGAT
CAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.197

100

0.597


Multiple sequence alignment