Detailed information NTG0981690

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACKUFV_RS18030
• Genome accession: NZ_CP183084
• Coordinates: 3633610..3634635 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain 439
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3628610..3639635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKUFV_RS18010 (ACKUFV_17975)	metJ	3629795..3630112 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACKUFV_RS18015 (ACKUFV_17980)	yiiX	3630172..3630780 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACKUFV_RS18020 (ACKUFV_17985)	rpmE	3630841..3631053 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACKUFV_RS18025 (ACKUFV_17990)	priA	3631256..3633454 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACKUFV_RS18030 (ACKUFV_17995)	cytR	3633610..3634635 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACKUFV_RS18035 (ACKUFV_18000)	ftsN	3634727..3635686 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACKUFV_RS18040 (ACKUFV_18005)	hslV	3635779..3636309 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACKUFV_RS18045 (ACKUFV_18010)	hslU	3636319..3637650 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACKUFV_RS18050 (ACKUFV_18015)	menA	3637717..3638643 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACKUFV_RS18055 (ACKUFV_18020)	rraA	3638736..3639221 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACKUFV_RS18060 (ACKUFV_18025)	zapB	3639306..3639551 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=981690 ACKUFV_RS18030 WP_000644908.1 3633610..3634635(+) (cytR) [Escherichia coli strain 439]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=981690 ACKUFV_RS18030 WP_000644908.1 3633610..3634635(+) (cytR) [Escherichia coli strain 439]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625