Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   NYE22_RS01720 Genome accession   NZ_CP151946
Coordinates   308833..308952 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. FSL K6-1560     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 303833..313952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE22_RS01690 (NYE22_01690) - 304491..305051 (-) 561 WP_342412252.1 hypothetical protein -
  NYE22_RS01695 (NYE22_01695) - 305044..305691 (-) 648 WP_342412253.1 ABC transporter ATP-binding protein -
  NYE22_RS01700 (NYE22_01700) - 305694..306491 (-) 798 WP_235701103.1 hypothetical protein -
  NYE22_RS01705 (NYE22_01705) - 306501..307175 (-) 675 WP_015714894.1 hypothetical protein -
  NYE22_RS01710 (NYE22_01710) - 307162..307950 (-) 789 WP_038829810.1 membrane protein -
  NYE22_RS01715 (NYE22_01715) - 308101..308580 (-) 480 WP_103804110.1 hypothetical protein -
  NYE22_RS01720 (NYE22_01720) phrF 308833..308952 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  NYE22_RS01725 (NYE22_01725) rapF 308936..310081 (-) 1146 WP_038829812.1 response regulator aspartate phosphatase RapF Regulator
  NYE22_RS01730 (NYE22_01730) - 310084..310314 (+) 231 Protein_316 hypothetical protein -
  NYE22_RS01735 (NYE22_01735) - 310311..311666 (+) 1356 WP_015250986.1 YncE family protein -
  NYE22_RS01740 (NYE22_01740) - 311705..313081 (+) 1377 WP_077670953.1 YncE family protein -
  NYE22_RS01745 (NYE22_01745) albG 313087..313788 (-) 702 WP_077670954.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=981684 NYE22_RS01720 WP_009968329.1 308833..308952(-) (phrF) [Bacillus sp. FSL K6-1560]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=981684 NYE22_RS01720 WP_009968329.1 308833..308952(-) (phrF) [Bacillus sp. FSL K6-1560]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment