Detailed information NTG0981630

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NYE38_RS17455
• Genome accession: NZ_CP151944
• Coordinates: 3480523..3481686 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus sp. EU63
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3475523..3486686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE38_RS17425 (NYE38_17425)	-	3475788..3476207 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
NYE38_RS17430 (NYE38_17430)	comFC	3476281..3476970 (-)	690	WP_217425079.1	phosphoribosyltransferase family protein	Machinery gene
NYE38_RS17435 (NYE38_17435)	-	3476976..3477260 (-)	285	WP_017418816.1	competence protein ComFB	-
NYE38_RS17440 (NYE38_17440)	comFA	3477318..3478703 (-)	1386	WP_017418815.1	DEAD/DEAH box helicase	Machinery gene
NYE38_RS17445 (NYE38_17445)	-	3478811..3479659 (-)	849	WP_237586810.1	DegV family protein	-
NYE38_RS17450 (NYE38_17450)	degU	3479757..3480446 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
NYE38_RS17455 (NYE38_17455)	degS	3480523..3481686 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
NYE38_RS17460 (NYE38_17460)	-	3481909..3482556 (+)	648	WP_340801881.1	YigZ family protein	-
NYE38_RS17465 (NYE38_17465)	-	3482561..3483748 (+)	1188	WP_339078402.1	LCP family protein	-
NYE38_RS17470 (NYE38_17470)	-	3483848..3484924 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
NYE38_RS17475 (NYE38_17475)	-	3485056..3486252 (-)	1197	WP_071182023.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=981630 NYE38_RS17455 WP_007407484.1 3480523..3481686(-) (degS) [Bacillus sp. EU63]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=981630 NYE38_RS17455 WP_007407484.1 3480523..3481686(-) (degS) [Bacillus sp. EU63]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGAAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCAGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951