Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NYE38_RS05675 Genome accession   NZ_CP151944
Coordinates   1101232..1102185 (+) Length   317 a.a.
NCBI ID   WP_017417445.1    Uniprot ID   -
Organism   Bacillus sp. EU63     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1096232..1107185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE38_RS05650 (NYE38_05650) argF 1098050..1099021 (+) 972 WP_340803054.1 ornithine carbamoyltransferase -
  NYE38_RS05655 (NYE38_05655) - 1099096..1099275 (+) 180 WP_003155070.1 YjzC family protein -
  NYE38_RS05660 (NYE38_05660) - 1099312..1099497 (-) 186 WP_007409129.1 YjzD family protein -
  NYE38_RS05665 (NYE38_05665) - 1099758..1100492 (+) 735 WP_014417405.1 hypothetical protein -
  NYE38_RS05670 (NYE38_05670) - 1100575..1101141 (+) 567 WP_340803053.1 hypothetical protein -
  NYE38_RS05675 (NYE38_05675) med 1101232..1102185 (+) 954 WP_017417445.1 BMP family ABC transporter substrate-binding protein Regulator
  NYE38_RS05680 (NYE38_05680) comZ 1102198..1102389 (+) 192 WP_017417446.1 ComZ family protein Regulator
  NYE38_RS05685 (NYE38_05685) - 1102418..1102636 (-) 219 WP_007409123.1 hypothetical protein -
  NYE38_RS05690 (NYE38_05690) - 1102804..1103742 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  NYE38_RS05695 (NYE38_05695) fabF 1103765..1105003 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  NYE38_RS05700 (NYE38_05700) - 1105087..1105872 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  NYE38_RS05705 (NYE38_05705) - 1106046..1107032 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35359.98 Da        Isoelectric Point: 4.6686

>NTDB_id=981583 NYE38_RS05675 WP_017417445.1 1101232..1102185(+) (med) [Bacillus sp. EU63]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKNNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYLAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=981583 NYE38_RS05675 WP_017417445.1 1101232..1102185(+) (med) [Bacillus sp. EU63]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAAACAATGAGGTCGGCGTCATCGCCTCTTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGAGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCTGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACAGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

77.603

100

0.776

Multiple sequence alignment