Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ACNM7T_RS08630 Genome accession   NZ_CP183041
Coordinates   1689202..1690470 (+) Length   422 a.a.
NCBI ID   WP_099566744.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain Scm     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1684202..1695470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNM7T_RS08605 (ACNM7T_08605) pyrH 1684997..1685719 (+) 723 WP_094031707.1 UMP kinase -
  ACNM7T_RS08610 (ACNM7T_08610) frr 1685722..1686279 (+) 558 WP_003154212.1 ribosome recycling factor -
  ACNM7T_RS08615 (ACNM7T_08615) - 1686405..1687187 (+) 783 WP_007611457.1 isoprenyl transferase -
  ACNM7T_RS08620 (ACNM7T_08620) - 1687191..1687988 (+) 798 WP_007409796.1 phosphatidate cytidylyltransferase -
  ACNM7T_RS08625 (ACNM7T_08625) dxr 1688044..1689195 (+) 1152 WP_197200193.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  ACNM7T_RS08630 (ACNM7T_08630) eeP 1689202..1690470 (+) 1269 WP_099566744.1 RIP metalloprotease RseP Regulator
  ACNM7T_RS08635 (ACNM7T_08635) proS 1690502..1692196 (+) 1695 WP_003154202.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46558.47 Da        Isoelectric Point: 6.5185

>NTDB_id=981564 ACNM7T_RS08630 WP_099566744.1 1689202..1690470(+) (eeP) [Bacillus amyloliquefaciens strain Scm]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALMIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=981564 ACNM7T_RS08630 WP_099566744.1 1689202..1690470(+) (eeP) [Bacillus amyloliquefaciens strain Scm]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATCGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAAGAAAAATATCC
CGACGCTTTAATGATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCCTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGAGGTCATGGACAGACATC
GTGACAGCGGTAAAAGAAAATCCCGGAAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATCGCCTATGGCGCGACATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGAGCAAACTTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGTATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATTGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GGCGGCTGCTGTTTTTATTCATTGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4

Multiple sequence alignment