Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NSS81_RS19270 Genome accession   NZ_CP151943
Coordinates   3837558..3838505 (+) Length   315 a.a.
NCBI ID   WP_342430252.1    Uniprot ID   -
Organism   Neobacillus sp. FSL H8-0543     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3832558..3843505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS81_RS19250 (NSS81_19250) clpB 3832719..3835313 (+) 2595 WP_342430248.1 ATP-dependent chaperone ClpB -
  NSS81_RS19255 (NSS81_19255) - 3835376..3835561 (-) 186 WP_342430249.1 YjzD family protein -
  NSS81_RS19260 (NSS81_19260) - 3835759..3836481 (+) 723 WP_342430250.1 hydrolase -
  NSS81_RS19265 (NSS81_19265) - 3836567..3837409 (+) 843 WP_342430251.1 hypothetical protein -
  NSS81_RS19270 (NSS81_19270) med 3837558..3838505 (+) 948 WP_342430252.1 BMP family ABC transporter substrate-binding protein Regulator
  NSS81_RS19275 (NSS81_19275) - 3838554..3838802 (-) 249 WP_342430253.1 hypothetical protein -
  NSS81_RS19280 (NSS81_19280) - 3838997..3839929 (+) 933 WP_342430254.1 beta-ketoacyl-ACP synthase III -
  NSS81_RS19285 (NSS81_19285) fabF 3839972..3841210 (+) 1239 WP_342430255.1 beta-ketoacyl-ACP synthase II -
  NSS81_RS19290 (NSS81_19290) - 3841586..3842386 (+) 801 WP_342430256.1 DUF2268 domain-containing putative Zn-dependent protease -
  NSS81_RS19295 (NSS81_19295) - 3842537..3843283 (+) 747 WP_342430257.1 YjbA family protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34948.50 Da        Isoelectric Point: 4.4785

>NTDB_id=981551 NSS81_RS19270 WP_342430252.1 3837558..3838505(+) (med) [Neobacillus sp. FSL H8-0543]
MLNRYGMIVLCLLLLGGCGSIDSASTLQKVGLLVPETVDDQVWGTKGYKGLLKIQSQFDVEVFYKEGMNSQQMVEQAVKE
FEQKGVNLIFGHGSEYAEYFNSISESYPAIHFVSFNGDAKKKNTTSLNFKGHAMGFFGGMVASYMSEANKVGVLAAYEWQ
PEVEGFYQGAIAENKDTDVSIIYVGNWDDENRAIQSVNSMIAEGVDVVYPAGDGYNIPVIEKVKEHGLFVIGYVSDQSDL
GESTVLTSTIQQVDKLYVNVAEQFKNKELQSGNLSFDFKDNVISLGEFSPLVNKDYIKKIEKQIEVYKETGKLPN

Nucleotide


Download         Length: 948 bp        

>NTDB_id=981551 NSS81_RS19270 WP_342430252.1 3837558..3838505(+) (med) [Neobacillus sp. FSL H8-0543]
ATGCTAAACCGTTATGGGATGATAGTTTTATGCCTTTTATTGCTTGGAGGATGCGGGAGCATAGATTCTGCAAGCACACT
GCAAAAGGTTGGCTTGTTAGTACCAGAAACAGTTGATGACCAAGTATGGGGAACGAAAGGGTATAAAGGATTGTTAAAAA
TACAGTCACAGTTCGATGTTGAAGTTTTTTATAAAGAAGGCATGAATTCACAACAAATGGTCGAACAGGCAGTTAAAGAA
TTTGAACAAAAAGGTGTTAATCTTATTTTTGGACATGGTTCCGAGTACGCCGAATATTTCAATTCTATCTCTGAATCCTA
TCCCGCTATTCACTTTGTAAGCTTTAATGGCGACGCAAAAAAGAAAAATACGACAAGCCTAAATTTTAAGGGACATGCAA
TGGGTTTTTTTGGAGGGATGGTCGCCTCTTATATGTCTGAGGCAAATAAGGTTGGAGTTTTAGCAGCTTATGAATGGCAG
CCGGAGGTAGAGGGTTTTTATCAAGGAGCCATAGCTGAAAATAAAGACACGGATGTAAGCATCATTTATGTTGGAAATTG
GGACGATGAAAACAGGGCAATTCAATCTGTTAACTCCATGATTGCTGAAGGGGTTGATGTCGTTTACCCGGCTGGTGATG
GTTACAATATCCCTGTAATTGAAAAGGTGAAGGAACATGGATTATTTGTGATTGGTTATGTTTCGGATCAATCTGATTTA
GGGGAATCTACCGTTTTAACGAGCACCATCCAGCAAGTTGATAAACTGTATGTGAATGTTGCTGAACAATTTAAGAACAA
AGAATTACAATCAGGAAATCTTTCCTTTGATTTTAAAGATAATGTCATTTCGCTTGGGGAATTTAGTCCCTTGGTGAATA
AGGATTATATAAAAAAGATTGAAAAACAGATTGAAGTGTATAAAGAAACGGGCAAATTGCCAAATTAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

52.866

99.683

0.527

Multiple sequence alignment