Detailed information NTG0098152

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ABXG87_RS10060
• Genome accession: NZ_AP031488
• Coordinates: 2105869..2106969 (+)
• Length: 366 a.a.
• NCBI ID: WP_045769304.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain NBRC 13956
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2100869..2111969

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXG87_RS10035 (Ssa13956_19120)	pgsA	2101411..2101953 (-)	543	WP_002885640.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ABXG87_RS10040 (Ssa13956_19130)	-	2101966..2102823 (-)	858	WP_045769307.1	RodZ domain-containing protein	-
ABXG87_RS10045 (Ssa13956_19140)	-	2102882..2104159 (-)	1278	WP_045769306.1	pitrilysin family protein	-
ABXG87_RS10050 (Ssa13956_19150)	-	2104161..2105411 (-)	1251	WP_045769305.1	pitrilysin family protein	-
ABXG87_RS10055 (Ssa13956_19160)	yaaA	2105489..2105866 (+)	378	WP_014635201.1	S4 domain-containing protein YaaA	-
ABXG87_RS10060 (Ssa13956_19170)	recF	2105869..2106969 (+)	1101	WP_045769304.1	DNA replication/repair protein RecF	Machinery gene
ABXG87_RS10065 (Ssa13956_19180)	guaB	2107152..2108633 (-)	1482	WP_013991341.1	IMP dehydrogenase	-
ABXG87_RS10070 (Ssa13956_19190)	trpS	2108812..2109834 (-)	1023	WP_002883969.1	tryptophan--tRNA ligase	-
ABXG87_RS10075 (Ssa13956_19200)	-	2110263..2111135 (+)	873	WP_002883963.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42221.29 Da
• Isoelectric Point: 8.3941

>NTDB_id=98152 ABXG87_RS10060 WP_045769304.1 2105869..2106969(+) (recF) [Streptococcus salivarius strain NBRC 13956]
MWLEKIDIQHFRNYTEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKELIQFQQNALKLNGIVHRYSGK
LPLEISLSNKGRITKVNHLKQAKLSDYIGHMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPVYLSDLSSYNHVLKQR
NAYLKSTDNVDINFLSVLDEQLSDFGARVIEHRLEFIKQLEEEADRHHSNLSNHIERLKISYESNIPLENNKVIRESFLT
TLKQNHKRDIFKKNTGVGPHRDDLTFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTGEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPDLKTFLVKNGNIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=98152 ABXG87_RS10060 WP_045769304.1 2105869..2106969(+) (recF) [Streptococcus salivarius strain NBRC 13956]
ATGTGGCTCGAAAAAATTGATATTCAACACTTTAGAAATTATACTGAAGCCTCTGTGAGCTTCTCACCTCATCTCAATAT
TTTTCTTGGTCGCAACGCTCAAGGAAAAACAAATATTCTTGAGGCAATCTATTTTCTAGCATTGACACGTAGTCATCGGA
CCCGTTCAGATAAGGAACTGATTCAATTTCAGCAAAATGCTCTCAAACTGAACGGCATTGTGCATCGTTATAGTGGGAAG
CTACCTCTGGAAATCAGTTTATCTAATAAAGGACGCATAACAAAGGTCAACCATCTCAAACAAGCTAAATTATCCGATTA
TATCGGTCACATGACGGTGGTGCTCTTTGCTCCTGAGGATTTACAACTTATAAAAGGATCTCCAAGCCTAAGGCGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTATCTCTCAGACTTATCAAGTTATAATCATGTACTCAAACAACGT
AATGCCTATCTCAAATCTACTGACAATGTAGACATTAATTTCCTCTCAGTGTTAGATGAACAGCTTTCCGATTTTGGAGC
ACGAGTTATCGAACATAGACTAGAATTTATCAAGCAATTAGAGGAGGAGGCAGATAGACATCATAGTAACCTCTCAAATC
ATATAGAGCGCCTTAAAATCTCCTACGAATCTAATATTCCACTGGAAAATAACAAAGTTATTCGCGAATCATTTTTAACC
ACGTTAAAGCAAAATCACAAAAGAGATATCTTCAAAAAGAACACTGGTGTTGGTCCACATAGGGATGATTTGACATTTTA
CATCAATGACATGAACGCATCTTTCGGCAGTCAGGGGCAGCAACGTAGCCTCATTCTTTCTTTAAAAATGGCTGAGATTG
CTCTGATAAAAAAAGTAACAGGTGAATTTCCTATTCTTCTCCTCGATGATGTCATGAGTGAGCTTGACAACCACCGTCAA
CTTAAACTGTTAGAAAGTATTGACGAAGAGGTTCAAACCTTCATGACGACAACTTCACTTGATCATCTGAGTAACCTACC
ACCTGATTTAAAGACCTTCTTAGTCAAGAATGGTAATATTTATGAAAAACAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-343)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.084	97.814	0.637
recF	Bacillus subtilis subsp. subtilis str. 168	43.902	100	0.443