Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ACNR0F_RS02325 | Genome accession | NZ_CP183037 |
| Coordinates | 421311..421646 (+) | Length | 111 a.a. |
| NCBI ID | WP_418605039.1 | Uniprot ID | - |
| Organism | Kingella kingae strain URMC_2412A945 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 416311..426646
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNR0F_RS02305 (ACNR0F_02305) | - | 416376..418745 (-) | 2370 | WP_285052202.1 | penicillin-binding protein 1A | - |
| ACNR0F_RS02310 (ACNR0F_02310) | pilM | 418887..419990 (+) | 1104 | WP_003785822.1 | type IV pilus biogenesis protein PilM | - |
| ACNR0F_RS02315 (ACNR0F_02315) | pilN | 419992..420651 (+) | 660 | WP_003785824.1 | PilN domain-containing protein | Machinery gene |
| ACNR0F_RS02320 (ACNR0F_02320) | - | 420654..421277 (+) | 624 | WP_003785825.1 | type 4a pilus biogenesis protein PilO | - |
| ACNR0F_RS02325 (ACNR0F_02325) | pilP | 421311..421646 (+) | 336 | WP_418605039.1 | pilus assembly protein PilP | Machinery gene |
| ACNR0F_RS02330 (ACNR0F_02330) | pilP | 421639..421842 (+) | 204 | WP_418605040.1 | pilus assembly protein PilP | Machinery gene |
| ACNR0F_RS02335 (ACNR0F_02335) | pilQ | 421876..423978 (+) | 2103 | WP_003789799.1 | type IV pilus secretin PilQ | Machinery gene |
| ACNR0F_RS02340 (ACNR0F_02340) | - | 424035..424547 (+) | 513 | WP_003789800.1 | shikimate kinase | - |
| ACNR0F_RS02345 (ACNR0F_02345) | aroB | 424547..425629 (+) | 1083 | WP_418605041.1 | 3-dehydroquinate synthase | - |
| ACNR0F_RS02350 (ACNR0F_02350) | - | 425648..426064 (+) | 417 | WP_038311036.1 | ProQ/FINO family protein | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12790.72 Da Isoelectric Point: 4.7707
>NTDB_id=981453 ACNR0F_RS02325 WP_418605039.1 421311..421646(+) (pilP) [Kingella kingae strain URMC_2412A945]
MKVKLFLMSALVLAGCSEQYGDLQEWMSQARAEAKTKVRPVEPLAPIEPVTYFAPQITGPNAFNMQRMKAAFQNGNAPDL
NRSKELLENYSLEEFTVCWFNWYTWFIIGFD
MKVKLFLMSALVLAGCSEQYGDLQEWMSQARAEAKTKVRPVEPLAPIEPVTYFAPQITGPNAFNMQRMKAAFQNGNAPDL
NRSKELLENYSLEEFTVCWFNWYTWFIIGFD
Nucleotide
Download Length: 336 bp
>NTDB_id=981453 ACNR0F_RS02325 WP_418605039.1 421311..421646(+) (pilP) [Kingella kingae strain URMC_2412A945]
ATGAAAGTTAAATTATTTTTGATGTCAGCACTAGTGCTGGCAGGCTGTTCTGAACAGTATGGGGATTTGCAAGAGTGGAT
GAGTCAAGCAAGAGCAGAGGCAAAAACAAAAGTTCGCCCTGTTGAGCCTTTGGCACCGATTGAACCCGTTACTTATTTTG
CACCTCAAATTACAGGGCCGAATGCGTTTAATATGCAACGTATGAAAGCAGCTTTCCAAAATGGTAATGCGCCAGATTTG
AACCGAAGTAAAGAATTGCTAGAAAATTATAGCCTAGAAGAATTTACGGTATGTTGGTTCAATTGGTACACCTGGTTCAT
TATCGGCTTTGATTGA
ATGAAAGTTAAATTATTTTTGATGTCAGCACTAGTGCTGGCAGGCTGTTCTGAACAGTATGGGGATTTGCAAGAGTGGAT
GAGTCAAGCAAGAGCAGAGGCAAAAACAAAAGTTCGCCCTGTTGAGCCTTTGGCACCGATTGAACCCGTTACTTATTTTG
CACCTCAAATTACAGGGCCGAATGCGTTTAATATGCAACGTATGAAAGCAGCTTTCCAAAATGGTAATGCGCCAGATTTG
AACCGAAGTAAAGAATTGCTAGAAAATTATAGCCTAGAAGAATTTACGGTATGTTGGTTCAATTGGTACACCTGGTTCAT
TATCGGCTTTGATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
48.936 |
84.685 |
0.414 |