Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ABXG87_RS07455 Genome accession   NZ_AP031488
Coordinates   1602548..1603354 (-) Length   268 a.a.
NCBI ID   WP_118172094.1    Uniprot ID   -
Organism   Streptococcus salivarius strain NBRC 13956     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1597548..1608354
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXG87_RS07425 (Ssa13956_14030) - 1598062..1598883 (-) 822 WP_353551376.1 Cof-type HAD-IIB family hydrolase -
  ABXG87_RS07430 (Ssa13956_14040) - 1598901..1599557 (-) 657 WP_004183048.1 glucosaminidase domain-containing protein -
  ABXG87_RS07435 (Ssa13956_14050) - 1599648..1599989 (-) 342 WP_002886165.1 P-II family nitrogen regulator -
  ABXG87_RS07440 (Ssa13956_14060) - 1600000..1601235 (-) 1236 WP_013991001.1 ammonium transporter -
  ABXG87_RS07445 (Ssa13956_14070) rsmI 1601372..1602238 (-) 867 WP_045769037.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ABXG87_RS07450 (Ssa13956_14080) yabA 1602241..1602561 (-) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  ABXG87_RS07455 (Ssa13956_14090) yaaT 1602548..1603354 (-) 807 WP_118172094.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  ABXG87_RS07460 (Ssa13956_14100) - 1603351..1604226 (-) 876 WP_118172093.1 DNA polymerase III subunit delta' -
  ABXG87_RS07465 (Ssa13956_14110) tmk 1604235..1604864 (-) 630 WP_353551378.1 dTMP kinase -
  ABXG87_RS07475 (Ssa13956_14120) recP/tkt 1605153..1607138 (-) 1986 WP_070850181.1 transketolase Machinery gene
  ABXG87_RS07480 (Ssa13956_14130) tpiA 1607398..1608156 (-) 759 WP_002890214.1 triose-phosphate isomerase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29771.18 Da        Isoelectric Point: 4.6456

>NTDB_id=98114 ABXG87_RS07455 WP_118172094.1 1602548..1603354(-) (yaaT) [Streptococcus salivarius strain NBRC 13956]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVIENTDFPEVSLPTDLNRVEGLAGEKDFARYDENLLK
AEKSMGVVADLIAQNQLDMKVVDIVFPLNNSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGMGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=98114 ABXG87_RS07455 WP_118172094.1 1602548..1603354(-) (yaaT) [Streptococcus salivarius strain NBRC 13956]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATACGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGCCTAGCCCAGGTTGTCATAGAAAACACAGATTTTCCTGAGGTTA
GTTTGCCTACGGATTTGAATCGGGTTGAAGGATTGGCAGGGGAGAAAGATTTCGCTAGATATGATGAAAATCTTTTGAAG
GCCGAAAAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAGGTGGTTGATATTGTCTTTCC
GCTAAATAACTCTTATGTGTTAATCAGTTTTGTAGCTGAAAAACGGGTAGATTTTCGTCAGTTGCTCAAAGATCTGGCTT
CTTACTTTAAGACACGCATTGAGTTACGTCAGATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGACCTTGT
GGCCGGGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCTAGTTATCCTGACTTGGGTGATGAAATTGAAACCAAGGATGGCATGGGTCAGGTTGTTGCCATTGATGTGATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.697

99.627

0.425

Multiple sequence alignment