Detailed information NTG0981082

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AAGA51_RS02520
• Genome accession: NZ_CP151842
• Coordinates: 544327..547713 (-)
• Length: 1128 a.a.
• NCBI ID: WP_042484730.1
• Uniprot ID: -
• Organism: Vibrio diazotrophicus strain ATCC 33466
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 539327..552713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAGA51_RS02505	-	539702..540727 (-)	1026	WP_042484447.1	ABC transporter permease	-
AAGA51_RS02510	-	540730..541716 (-)	987	WP_042484444.1	ABC transporter permease	-
AAGA51_RS02515	-	541861..543531 (-)	1671	WP_042484441.1	ABC transporter substrate-binding protein	-
AAGA51_RS02520	chiS	544327..547713 (-)	3387	WP_042484730.1	response regulator	Regulator
AAGA51_RS02525	rsmC	547876..548901 (-)	1026	WP_042484439.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AAGA51_RS02530	-	548989..550074 (-)	1086	WP_042484437.1	AI-2E family transporter	-
AAGA51_RS02535	-	550112..550270 (+)	159	WP_156102032.1	hypothetical protein	-
AAGA51_RS02540	hemL	550315..551610 (-)	1296	WP_042484433.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AAGA51_RS02545	erpA	551900..552244 (+)	345	WP_269350263.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127873.39 Da
• Isoelectric Point: 5.9667

>NTDB_id=981082 AAGA51_RS02520 WP_042484730.1 544327..547713(-) (chiS) [Vibrio diazotrophicus strain ATCC 33466]
MFRFYRRQKFKRLQNTLMLAFLVLSITPLTVTAIFFLKSHIDDLQEQSTSHLLSVRDTKQQQVIDYLSAKESEVMGFVRS
ELAYASGGRFYGLVNAFTRLGENIEQARENAQQRYILGSGDQVKTSVLPQSSSYVGSERYRLLHKRYHWAYMELLKRSDF
DDILLVDLQGNITYSINKNEEYGTNLFSGKFKDANLGQTFQRLEETVSEQRKNNEDFTPVILSDFVEENGQQYAWFGAPI
IQQGYLHSYAMFRLPNKGITKLIADSNNSPMQTLLVGPDHRSRTLSYLQDDIDKSREVINLALSGKKEVGTYTDAVGEKN
IAAYAPINLNSTHWAIVVELPEKEAFARVNQLEKLFIFAMLTAIVLVVIASHMLSNFITSPLLRLTWAAERASAGDLDES
MINTDRKDEIGRLAVSFERMQRSIREKIQLIKSQNSELEKNIQIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGI
AEALISGANGPITSDHKYQLDIIATSGQRLARLVDNLLDYHKMRYGDLDIQCDAVDLSSSTRLVLELSNHLLGKKPIRII
NQISDNQFWVSADPQRLEQVLYNLIGNAIKYTSEGKIVISASQIDDQVRVQVVDTGQGIPAEQLEHIFEPLIQGTVETNR
YRQGSGLGLSISRQLIELMNGTLYVSSQPLVGTTFSFTLPIASAEDIERARLTEQPHYQVLEVGEVELPDTSNLPENSDG
PLLLVADDEPVNLRILDSFLRLEGYRVRTVADGNEVLRAVENEKPELLLLDIMMPGMSGYQVCEKLREKYSLTDLPIIML
TALNQTEDRLRGFAAGANDYLSKPFNKKELAARIHAHMAASQAEQRRLENLELQNELKQRNVVEADLLETQERLLEQLES
APEAIVCLKENNKVLFANQAASRLFKRTQEQLKRSSAEELFSHKHLNITQEHYCGEVDIFVGDSRLHLPADILKLPKGSG
MQAIYILNIGGAQSAQRIHNLETAVDALSSYAFSGDKERLQQLKELGGEFTRIADKAEGDNQSKQELMRAVLVDAMTSAL
NYWEKAPGQTKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILEHHNEQGSERTHLEALRNK
LQKLIAAM

Nucleotide

• Length: 3387 bp

>NTDB_id=981082 AAGA51_RS02520 WP_042484730.1 544327..547713(-) (chiS) [Vibrio diazotrophicus strain ATCC 33466]
ATGTTCAGGTTTTATCGCAGGCAAAAGTTTAAACGCTTACAAAACACCTTGATGCTGGCCTTTCTGGTTCTCAGCATTAC
TCCTCTGACTGTCACAGCTATTTTCTTCTTGAAGTCTCATATTGACGATCTTCAAGAACAAAGTACCTCCCACCTGCTGT
CAGTTCGGGACACCAAACAACAACAAGTTATCGACTACCTCAGCGCCAAAGAGTCTGAGGTGATGGGTTTTGTCCGCTCA
GAACTCGCCTATGCCAGTGGTGGACGATTTTATGGCCTAGTCAATGCTTTTACACGTTTGGGCGAAAACATAGAACAAGC
CAGAGAGAACGCTCAACAGCGCTATATCTTAGGTTCCGGAGATCAGGTCAAAACGTCGGTGTTACCTCAATCCAGCAGCT
ATGTCGGAAGTGAGCGTTACCGCCTTTTGCATAAACGCTATCACTGGGCATACATGGAACTGCTCAAACGCTCTGATTTT
GATGATATTTTATTGGTCGATTTACAAGGGAATATCACTTACTCAATCAATAAAAACGAAGAGTACGGTACCAACCTGTT
TAGCGGAAAATTCAAAGACGCGAACTTAGGTCAGACCTTTCAGCGCTTAGAAGAAACTGTTTCCGAACAGAGAAAAAACA
ACGAAGATTTTACCCCTGTCATTCTTTCCGATTTTGTTGAGGAAAACGGACAACAATACGCCTGGTTTGGCGCACCGATC
ATTCAACAAGGTTATCTACACAGCTATGCGATGTTCCGCCTGCCAAACAAGGGAATCACCAAACTCATCGCTGATAGCAA
CAACTCACCAATGCAGACGCTTCTTGTCGGGCCAGATCACCGCTCCCGAACGCTTTCTTACCTACAAGACGATATAGATA
AAAGTCGTGAAGTCATAAATTTAGCCTTATCTGGCAAGAAAGAAGTAGGTACCTACACTGACGCCGTTGGTGAAAAAAAT
ATCGCAGCTTATGCTCCGATCAACCTAAACAGCACACATTGGGCTATTGTCGTAGAACTGCCCGAAAAAGAGGCTTTTGC
GCGCGTAAACCAGTTAGAAAAACTGTTCATTTTTGCCATGCTGACCGCCATCGTGCTAGTGGTTATCGCGTCACACATGC
TTTCAAACTTCATTACTTCACCACTGTTAAGACTAACGTGGGCAGCTGAACGAGCATCCGCTGGAGATCTCGATGAAAGT
ATGATTAATACCGATCGTAAAGATGAGATTGGTCGTCTTGCGGTGAGCTTTGAACGTATGCAGCGTTCTATCCGTGAAAA
AATCCAACTCATCAAATCGCAAAACAGTGAATTGGAAAAAAACATCCAAATCATTAGAAAACAAAACGATGAACTGCAAC
TTGCGAACAAGCTGAAAGATGAATTTCTGGCCACAACCTCTCACGAGCTGAGAACTCCTCTGCACGGCATGATTGGTATT
GCAGAAGCCTTAATATCCGGCGCTAACGGTCCTATTACTTCTGATCACAAATATCAGTTGGATATTATTGCCACCAGTGG
ACAACGCCTTGCTCGACTGGTCGATAACTTACTCGACTACCATAAGATGCGTTATGGCGACTTGGATATTCAGTGTGATG
CGGTTGATCTGTCCAGCTCAACGCGCTTGGTGTTAGAACTCTCTAACCACCTGTTGGGTAAGAAGCCTATAAGAATCATC
AATCAAATTTCAGACAATCAGTTCTGGGTTTCCGCAGATCCGCAGCGTTTAGAGCAAGTGCTGTATAACCTGATTGGTAA
CGCGATCAAATATACGTCGGAAGGTAAGATTGTTATCTCTGCTTCTCAAATTGATGATCAGGTTCGCGTCCAAGTTGTCG
ATACCGGTCAAGGCATTCCCGCCGAGCAGTTGGAACATATCTTTGAACCGCTCATCCAAGGAACCGTAGAAACTAACCGC
TATCGCCAAGGTTCAGGTTTAGGCTTATCGATTAGCCGACAACTGATTGAACTGATGAACGGCACTCTTTATGTCAGCAG
CCAACCGCTGGTTGGTACAACATTCAGCTTCACGCTGCCTATTGCTTCGGCAGAAGATATTGAGCGCGCGAGACTGACTG
AACAGCCTCACTACCAAGTACTTGAAGTTGGAGAGGTTGAGCTGCCCGATACCAGCAATTTGCCGGAGAACAGTGACGGA
CCGTTACTGCTGGTTGCCGATGACGAACCTGTAAACCTGCGAATTCTGGACAGCTTCTTACGCTTGGAAGGTTATCGCGT
ACGTACCGTTGCTGATGGTAACGAAGTGCTAAGGGCCGTTGAGAACGAAAAGCCAGAGCTACTGCTGCTCGATATCATGA
TGCCGGGCATGAGTGGTTACCAAGTGTGTGAAAAGCTAAGAGAAAAATACAGCCTCACCGATTTACCTATCATCATGCTT
ACTGCGCTGAATCAAACAGAAGATCGCTTGAGAGGCTTTGCCGCTGGCGCGAATGACTATCTGTCAAAACCGTTCAATAA
AAAAGAGTTAGCAGCTAGGATTCATGCTCATATGGCCGCAAGTCAGGCAGAACAACGGCGATTGGAAAATCTTGAGTTGC
AAAACGAACTCAAGCAGAGAAATGTCGTCGAAGCTGATTTACTCGAAACACAAGAACGATTGCTGGAACAGTTAGAATCT
GCACCAGAAGCCATTGTGTGCCTCAAAGAAAACAATAAAGTTCTGTTCGCTAACCAAGCGGCATCCAGACTGTTTAAGCG
CACACAAGAGCAGCTGAAACGTTCTAGTGCTGAAGAGCTGTTTTCCCATAAACATCTCAATATTACTCAAGAACACTATT
GTGGCGAAGTCGATATTTTTGTTGGTGATTCACGCCTTCATTTACCAGCGGATATTCTAAAGCTCCCTAAAGGCTCTGGT
ATGCAGGCGATTTATATTTTAAATATTGGCGGTGCTCAGAGCGCACAAAGAATACATAACCTAGAAACAGCGGTTGATGC
CCTATCGAGTTATGCGTTTAGTGGCGATAAAGAAAGACTGCAGCAACTTAAAGAGTTAGGCGGAGAGTTTACCAGAATTG
CAGATAAAGCCGAAGGCGACAATCAATCCAAGCAAGAGCTTATGCGTGCAGTGCTTGTTGATGCGATGACAAGCGCACTC
AACTACTGGGAGAAAGCTCCCGGCCAAACCAAGTTCACTTTTGCAGAACAAAGCGGACTGTGGCGTGTTTACTTGGACAG
AAGTACATTACAAACACGTACACTCGACAAGTATCTGCGTATCGAAACGCTGCCGAAAACCCCACGCTGGCGTACCGTAC
TAAACTCGCTCGATTACATCCTTGAGCATCACAATGAGCAGGGGTCAGAGCGCACTCACCTTGAAGCCCTGCGTAACAAG
TTGCAGAAACTTATCGCTGCTATGTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (724-834)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-681)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (374-426)

• PAS fold (PAS) (874-925)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	78.901	100	0.789