Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AAFV99_RS08170 | Genome accession | NZ_CP151815 |
| Coordinates | 1616038..1616433 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain PS006-42 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1611038..1621433
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFV99_RS08140 (AAFV99_08140) | - | 1612297..1612701 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AAFV99_RS08145 (AAFV99_08145) | - | 1613038..1613130 (+) | 93 | WP_031835036.1 | hypothetical protein | - |
| AAFV99_RS08150 (AAFV99_08150) | - | 1613262..1613495 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AAFV99_RS08155 (AAFV99_08155) | murA | 1613606..1614871 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AAFV99_RS08160 (AAFV99_08160) | fabZ | 1614905..1615345 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AAFV99_RS08165 (AAFV99_08165) | - | 1615404..1615844 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AAFV99_RS08170 (AAFV99_08170) | ssb | 1616038..1616433 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| AAFV99_RS08175 (AAFV99_08175) | sceD | 1616822..1617517 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| AAFV99_RS08180 (AAFV99_08180) | tenA | 1618097..1618786 (+) | 690 | WP_000396079.1 | thiaminase II | - |
| AAFV99_RS08185 (AAFV99_08185) | thiD | 1618779..1619609 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AAFV99_RS08190 (AAFV99_08190) | thiM | 1619593..1620384 (+) | 792 | WP_001108480.1 | hydroxyethylthiazole kinase | - |
| AAFV99_RS08195 (AAFV99_08195) | thiE | 1620386..1621027 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=980965 AAFV99_RS08170 WP_000932694.1 1616038..1616433(+) (ssb) [Staphylococcus aureus strain PS006-42]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=980965 AAFV99_RS08170 WP_000932694.1 1616038..1616433(+) (ssb) [Staphylococcus aureus strain PS006-42]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |