Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | AAFV99_RS00830 | Genome accession | NZ_CP151815 |
| Coordinates | 124331..124774 (-) | Length | 147 a.a. |
| NCBI ID | WP_001099009.1 | Uniprot ID | A0A0C6EXF8 |
| Organism | Staphylococcus aureus strain PS006-42 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 84640..134434 | 124331..124774 | within | 0 |
Gene organization within MGE regions
Location: 84640..134434
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFV99_RS00540 (AAFV99_00540) | - | 84640..85467 (-) | 828 | WP_000927632.1 | sulfite exporter TauE/SafE family protein | - |
| AAFV99_RS00545 (AAFV99_00545) | - | 85480..86328 (-) | 849 | WP_000608129.1 | DUF72 domain-containing protein | - |
| AAFV99_RS00550 (AAFV99_00550) | - | 86462..86560 (-) | 99 | WP_031835132.1 | hypothetical protein | - |
| AAFV99_RS00555 (AAFV99_00555) | - | 86627..87694 (-) | 1068 | WP_000267249.1 | nitronate monooxygenase family protein | - |
| AAFV99_RS00560 (AAFV99_00560) | - | 87708..88748 (-) | 1041 | WP_000582326.1 | CNNM domain-containing protein | - |
| AAFV99_RS00565 (AAFV99_00565) | - | 89113..89427 (+) | 315 | WP_000274029.1 | hypothetical protein | - |
| AAFV99_RS00570 (AAFV99_00570) | - | 89433..89570 (-) | 138 | WP_001790198.1 | chorismate mutase | - |
| AAFV99_RS00575 (AAFV99_00575) | eta | 90102..90944 (-) | 843 | WP_001065781.1 | exfoliative toxin A | - |
| AAFV99_RS00580 (AAFV99_00580) | - | 91070..92482 (-) | 1413 | WP_015984528.1 | N-acetylmuramoyl-L-alanine amidase | - |
| AAFV99_RS00585 (AAFV99_00585) | - | 92469..92744 (-) | 276 | WP_000351119.1 | phage holin | - |
| AAFV99_RS00590 (AAFV99_00590) | - | 92800..93195 (-) | 396 | WP_000398868.1 | hypothetical protein | - |
| AAFV99_RS00595 (AAFV99_00595) | - | 93201..94439 (-) | 1239 | WP_015984527.1 | BppU family phage baseplate upper protein | - |
| AAFV99_RS00600 (AAFV99_00600) | - | 94452..96326 (-) | 1875 | WP_015984526.1 | glucosaminidase domain-containing protein | - |
| AAFV99_RS00605 (AAFV99_00605) | - | 96463..96762 (-) | 300 | WP_000466777.1 | DUF2951 domain-containing protein | - |
| AAFV99_RS00610 (AAFV99_00610) | - | 96802..96975 (-) | 174 | WP_000782200.1 | XkdX family protein | - |
| AAFV99_RS00615 (AAFV99_00615) | - | 96979..97356 (-) | 378 | WP_000705896.1 | DUF2977 domain-containing protein | - |
| AAFV99_RS00620 (AAFV99_00620) | - | 97356..99179 (-) | 1824 | WP_015984525.1 | phage baseplate upper protein | - |
| AAFV99_RS00625 (AAFV99_00625) | - | 99179..101077 (-) | 1899 | WP_015984524.1 | hypothetical protein | - |
| AAFV99_RS00630 (AAFV99_00630) | - | 101090..102976 (-) | 1887 | WP_015984523.1 | SGNH/GDSL hydrolase family protein | - |
| AAFV99_RS00635 (AAFV99_00635) | - | 102987..103928 (-) | 942 | WP_015984522.1 | phage tail domain-containing protein | - |
| AAFV99_RS00640 (AAFV99_00640) | - | 103943..106828 (-) | 2886 | WP_015984521.1 | hypothetical protein | - |
| AAFV99_RS00645 (AAFV99_00645) | - | 106832..107116 (-) | 285 | WP_000880587.1 | hypothetical protein | - |
| AAFV99_RS00650 (AAFV99_00650) | - | 107161..107667 (-) | 507 | WP_000134337.1 | tail assembly chaperone | - |
| AAFV99_RS00655 (AAFV99_00655) | - | 107734..108291 (-) | 558 | WP_000057582.1 | tail protein | - |
| AAFV99_RS00660 (AAFV99_00660) | - | 108292..108717 (-) | 426 | WP_000270192.1 | DUF3168 domain-containing protein | - |
| AAFV99_RS00665 (AAFV99_00665) | - | 108730..109143 (-) | 414 | WP_001151330.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| AAFV99_RS00670 (AAFV99_00670) | - | 109130..109465 (-) | 336 | WP_000483040.1 | phage head closure protein | - |
| AAFV99_RS00675 (AAFV99_00675) | - | 109477..109827 (-) | 351 | WP_000177351.1 | phage head-tail adapter protein | - |
| AAFV99_RS00680 (AAFV99_00680) | - | 109833..109976 (-) | 144 | WP_000002931.1 | hypothetical protein | - |
| AAFV99_RS00685 (AAFV99_00685) | - | 109988..110902 (-) | 915 | WP_000235168.1 | phage major capsid protein | - |
| AAFV99_RS00690 (AAFV99_00690) | - | 110919..111503 (-) | 585 | WP_001019221.1 | DUF4355 domain-containing protein | - |
| AAFV99_RS00695 (AAFV99_00695) | - | 111606..111812 (-) | 207 | WP_000346032.1 | hypothetical protein | - |
| AAFV99_RS00700 (AAFV99_00700) | - | 111814..112767 (-) | 954 | WP_015984520.1 | phage head morphogenesis protein | - |
| AAFV99_RS00705 (AAFV99_00705) | - | 112736..114159 (-) | 1424 | Protein_110 | phage portal protein | - |
| AAFV99_RS00710 (AAFV99_00710) | - | 114156..115379 (-) | 1224 | WP_001037578.1 | PBSX family phage terminase large subunit | - |
| AAFV99_RS00715 (AAFV99_00715) | - | 115372..115866 (-) | 495 | WP_000594088.1 | terminase small subunit | - |
| AAFV99_RS00720 (AAFV99_00720) | - | 116197..116619 (-) | 423 | WP_000162701.1 | RinA family phage transcriptional activator | - |
| AAFV99_RS00725 (AAFV99_00725) | - | 116643..116789 (-) | 147 | WP_000990005.1 | hypothetical protein | - |
| AAFV99_RS00730 (AAFV99_00730) | - | 116790..116963 (-) | 174 | WP_000595258.1 | transcriptional activator RinB | - |
| AAFV99_RS00735 (AAFV99_00735) | - | 117010..117534 (-) | 525 | WP_015984519.1 | hypothetical protein | - |
| AAFV99_RS00740 (AAFV99_00740) | - | 117534..117728 (-) | 195 | WP_015984518.1 | DUF1381 domain-containing protein | - |
| AAFV99_RS00745 (AAFV99_00745) | - | 117765..118301 (-) | 537 | WP_015984517.1 | dUTPase | - |
| AAFV99_RS00750 (AAFV99_00750) | - | 118294..118464 (-) | 171 | WP_000714413.1 | hypothetical protein | - |
| AAFV99_RS00755 (AAFV99_00755) | - | 118451..118705 (-) | 255 | WP_017804684.1 | DUF1024 family protein | - |
| AAFV99_RS00760 (AAFV99_00760) | - | 118698..119063 (-) | 366 | WP_001624703.1 | hypothetical protein | - |
| AAFV99_RS00765 (AAFV99_00765) | - | 119060..119509 (-) | 450 | WP_000982708.1 | YopX family protein | - |
| AAFV99_RS00770 (AAFV99_00770) | - | 119574..119816 (-) | 243 | WP_015984514.1 | SAV1978 family virulence-associated passenger protein | - |
| AAFV99_RS00775 (AAFV99_00775) | - | 119820..120176 (-) | 357 | WP_000029376.1 | SA1788 family PVL leukocidin-associated protein | - |
| AAFV99_RS00780 (AAFV99_00780) | - | 120304..120609 (-) | 306 | WP_000101252.1 | hypothetical protein | - |
| AAFV99_RS00785 (AAFV99_00785) | - | 120610..120795 (-) | 186 | WP_001187243.1 | DUF3113 family protein | - |
| AAFV99_RS00790 (AAFV99_00790) | - | 120800..121204 (-) | 405 | WP_000049794.1 | DUF1064 domain-containing protein | - |
| AAFV99_RS00795 (AAFV99_00795) | - | 121214..121435 (-) | 222 | WP_015984512.1 | DUF3269 family protein | - |
| AAFV99_RS00800 (AAFV99_00800) | - | 121448..121606 (-) | 159 | WP_000256589.1 | hypothetical protein | - |
| AAFV99_RS00805 (AAFV99_00805) | - | 121600..122379 (-) | 780 | WP_367112090.1 | ATP-binding protein | - |
| AAFV99_RS00810 (AAFV99_00810) | - | 122389..123159 (-) | 771 | WP_000190253.1 | conserved phage C-terminal domain-containing protein | - |
| AAFV99_RS00815 (AAFV99_00815) | - | 123225..123506 (+) | 282 | WP_000414755.1 | hypothetical protein | - |
| AAFV99_RS00820 (AAFV99_00820) | - | 123499..123648 (-) | 150 | WP_001081076.1 | hypothetical protein | - |
| AAFV99_RS00825 (AAFV99_00825) | - | 123645..124319 (-) | 675 | WP_367112091.1 | putative HNHc nuclease | - |
| AAFV99_RS00830 (AAFV99_00830) | ssbA | 124331..124774 (-) | 444 | WP_001099009.1 | single-stranded DNA-binding protein | Machinery gene |
| AAFV99_RS00835 (AAFV99_00835) | - | 124771..125421 (-) | 651 | WP_000840496.1 | ERF family protein | - |
| AAFV99_RS00840 (AAFV99_00840) | - | 125422..125958 (-) | 537 | WP_001004336.1 | host-nuclease inhibitor Gam family protein | - |
| AAFV99_RS00845 (AAFV99_00845) | - | 125971..126231 (-) | 261 | WP_000291067.1 | DUF1108 family protein | - |
| AAFV99_RS00850 (AAFV99_00850) | - | 126236..126538 (-) | 303 | WP_000165363.1 | DUF2482 family protein | - |
| AAFV99_RS00855 (AAFV99_00855) | - | 126632..126793 (-) | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| AAFV99_RS00860 (AAFV99_00860) | - | 126786..127007 (-) | 222 | WP_000977381.1 | hypothetical protein | - |
| AAFV99_RS00865 (AAFV99_00865) | - | 127021..127470 (-) | 450 | WP_001094943.1 | hypothetical protein | - |
| AAFV99_RS00870 (AAFV99_00870) | - | 127510..127734 (-) | 225 | WP_000187184.1 | hypothetical protein | - |
| AAFV99_RS00875 (AAFV99_00875) | - | 127735..128502 (-) | 768 | WP_001002757.1 | phage antirepressor Ant | - |
| AAFV99_RS00880 (AAFV99_00880) | - | 128502..128696 (-) | 195 | WP_000108122.1 | helix-turn-helix transcriptional regulator | - |
| AAFV99_RS00885 (AAFV99_00885) | - | 128959..129291 (+) | 333 | WP_001055143.1 | helix-turn-helix transcriptional regulator | - |
| AAFV99_RS00890 (AAFV99_00890) | - | 129308..129982 (+) | 675 | WP_000775187.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AAFV99_RS00895 (AAFV99_00895) | - | 130010..130735 (+) | 726 | WP_000661437.1 | PH domain-containing protein | - |
| AAFV99_RS00900 (AAFV99_00900) | - | 130767..131672 (+) | 906 | WP_136625574.1 | hypothetical protein | - |
| AAFV99_RS00905 (AAFV99_00905) | - | 131609..131809 (-) | 201 | WP_000143212.1 | excisionase | - |
| AAFV99_RS00910 (AAFV99_00910) | - | 131920..132969 (+) | 1050 | WP_015984510.1 | tyrosine-type recombinase/integrase | - |
| AAFV99_RS00915 (AAFV99_00915) | sufB | 133037..134434 (-) | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 16321.89 Da Isoelectric Point: 5.8347
>NTDB_id=980953 AAFV99_RS00830 WP_001099009.1 124331..124774(-) (ssbA) [Staphylococcus aureus strain PS006-42]
MNTVNLIGNLVADPELKGQNNNVVNFVIAVQRPFKNKQTNEYETDFIRCVAFGKTAEIIANNFNKGNKIGVTGSIQTGSY
ENNQGQKVFTTDIAVNNITFVERKNNGQSNNQQQHNSYNAPQNRQQSNNPFANANGPIEISDDDLPF
MNTVNLIGNLVADPELKGQNNNVVNFVIAVQRPFKNKQTNEYETDFIRCVAFGKTAEIIANNFNKGNKIGVTGSIQTGSY
ENNQGQKVFTTDIAVNNITFVERKNNGQSNNQQQHNSYNAPQNRQQSNNPFANANGPIEISDDDLPF
Nucleotide
Download Length: 444 bp
>NTDB_id=980953 AAFV99_RS00830 WP_001099009.1 124331..124774(-) (ssbA) [Staphylococcus aureus strain PS006-42]
ATGAATACAGTAAATTTAATTGGGAACCTAGTGGCAGATCCAGAGTTAAAAGGTCAAAACAACAACGTAGTTAACTTTGT
AATCGCAGTACAGAGACCATTCAAAAACAAACAAACTAACGAATATGAAACAGACTTCATTCGTTGTGTTGCATTTGGTA
AGACTGCTGAAATCATCGCTAATAACTTTAATAAAGGTAATAAAATTGGCGTTACTGGTTCAATACAAACCGGTAGTTAT
GAAAATAATCAAGGACAGAAAGTGTTTACTACAGACATCGCAGTCAACAATATAACTTTCGTTGAACGTAAAAACAACGG
TCAATCTAACAACCAACAACAGCATAATTCATATAACGCACCACAGAATAGACAGCAATCAAATAATCCATTTGCTAATG
CTAATGGTCCTATAGAAATCTCTGACGATGATTTACCTTTCTAG
ATGAATACAGTAAATTTAATTGGGAACCTAGTGGCAGATCCAGAGTTAAAAGGTCAAAACAACAACGTAGTTAACTTTGT
AATCGCAGTACAGAGACCATTCAAAAACAAACAAACTAACGAATATGAAACAGACTTCATTCGTTGTGTTGCATTTGGTA
AGACTGCTGAAATCATCGCTAATAACTTTAATAAAGGTAATAAAATTGGCGTTACTGGTTCAATACAAACCGGTAGTTAT
GAAAATAATCAAGGACAGAAAGTGTTTACTACAGACATCGCAGTCAACAATATAACTTTCGTTGAACGTAAAAACAACGG
TCAATCTAACAACCAACAACAGCATAATTCATATAACGCACCACAGAATAGACAGCAATCAAATAATCCATTTGCTAATG
CTAATGGTCCTATAGAAATCTCTGACGATGATTTACCTTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
41.279 |
100 |
0.483 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
38.235 |
100 |
0.442 |