Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ABXG87_RS03595 Genome accession   NZ_AP031488
Coordinates   804368..805048 (+) Length   226 a.a.
NCBI ID   WP_004182305.1    Uniprot ID   -
Organism   Streptococcus salivarius strain NBRC 13956     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 799368..810048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXG87_RS03570 (Ssa13956_06450) - 799696..799905 (+) 210 WP_353551930.1 hypothetical protein -
  ABXG87_RS03575 (Ssa13956_06460) - 800080..801429 (-) 1350 WP_045768579.1 MATE family efflux transporter -
  ABXG87_RS03580 (Ssa13956_06470) - 801601..802017 (+) 417 WP_353551932.1 pyridoxamine 5'-phosphate oxidase family protein -
  ABXG87_RS03585 (Ssa13956_06480) - 802069..803337 (-) 1269 WP_014632968.1 nucleobase:cation symporter-2 family protein -
  ABXG87_RS03590 (Ssa13956_06490) - 803337..803918 (-) 582 WP_061652343.1 xanthine phosphoribosyltransferase -
  ABXG87_RS03595 (Ssa13956_06500) braR 804368..805048 (+) 681 WP_004182305.1 response regulator transcription factor Regulator
  ABXG87_RS03600 (Ssa13956_06510) - 805038..806012 (+) 975 WP_353551934.1 sensor histidine kinase -
  ABXG87_RS03605 (Ssa13956_06520) - 806157..806915 (+) 759 WP_118171886.1 ABC transporter ATP-binding protein -
  ABXG87_RS03610 (Ssa13956_06530) - 806917..808917 (+) 2001 WP_353551936.1 ABC transporter permease -
  ABXG87_RS03615 (Ssa13956_06540) - 809002..809496 (+) 495 WP_002885314.1 YkgJ family cysteine cluster protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26073.42 Da        Isoelectric Point: 4.9992

>NTDB_id=98084 ABXG87_RS03595 WP_004182305.1 804368..805048(+) (braR) [Streptococcus salivarius strain NBRC 13956]
MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=98084 ABXG87_RS03595 WP_004182305.1 804368..805048(+) (braR) [Streptococcus salivarius strain NBRC 13956]
ATGCATAAGATTTTATTAGTGGAGGACGACGAGGTTATCCGTCAACAAGTCAAAAAAATGCTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTATTTTTGTAAAAGTAGAGCCCCACTTGGTTCTTATGGATATTG
GTTTACCTCTATTCAACGGTTATCATTGGTGTCAGGAAATTCGTAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCG
AGAGATCAGGCCATGGATATTGTTATGGCAATCAATATGGGCGGGGACGACTTTGTGACTAAACCTTTTGACCAAAATGT
TCTCCTAGCAAAAATTCAAGGGCTTTTGCGTCGTTCATATGAGTTTGGTAAGGATCAGAGTCTCTTGGAATATATGGGTG
TGATTCTGAACCTTAAGGCCATGGATTTGGTTTATCAGGGAGAGGTCGTTTCTTTGACAAAGAATGAGTTTCAGATTTTA
CAAGTTCTCTTTGATCATGCTGGTAATATCGTTAGTCGGGAAGACCTGATGAAGGAGCTTTGGAATAGTGACTTCTTTAT
TGATGACAATACCCTGTCAGTTAATGTAGCTCGTTTACGTAAGAAGTTAGAGGCAGTGGGTTTGAAGGATTTTATTGAAA
CCAAGAAAGGTGTTGGCTACGGGTTGCGTCATGATGGGTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

52.294

96.46

0.504
  micA Streptococcus pneumoniae Cp1015

35.043

100

0.363

Multiple sequence alignment