Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   R9C51_RS09665 Genome accession   NZ_AP026921
Coordinates   1867215..1868252 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain PZ900700027     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1862215..1873252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R9C51_RS09640 (PC0027_18950) - 1862954..1864285 (-) 1332 WP_317826766.1 hemolysin family protein -
  R9C51_RS09645 (PC0027_18960) endA 1864576..1865400 (-) 825 WP_061816961.1 DNA-entry nuclease EndA Machinery gene
  R9C51_RS09650 (PC0027_18970) - 1865439..1865627 (-) 189 WP_001036519.1 DNA-directed RNA polymerase subunit beta -
  R9C51_RS09655 (PC0027_18980) murA 1865620..1866903 (-) 1284 WP_000358035.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  R9C51_RS09660 (PC0027_18990) - 1866927..1867157 (-) 231 WP_001809307.1 DUF1146 family protein -
  R9C51_RS09665 (PC0027_19000) sepM 1867215..1868252 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  R9C51_RS09670 (PC0027_19010) coaD 1868236..1868724 (-) 489 WP_001280736.1 pantetheine-phosphate adenylyltransferase -
  R9C51_RS09675 (PC0027_19020) rsmD 1868714..1869253 (-) 540 WP_044788620.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  R9C51_RS09680 (PC0027_19030) asnA 1869318..1870310 (-) 993 WP_044791888.1 aspartate--ammonia ligase -
  R9C51_RS09685 (PC0027_19040) - 1870421..1871104 (-) 684 WP_001016917.1 Bax inhibitor-1/YccA family protein -
  R9C51_RS09690 (PC0027_19050) - 1871160..1871900 (-) 741 WP_044791890.1 RNA methyltransferase -
  R9C51_RS09695 (PC0027_19060) - 1871934..1872212 (+) 279 WP_001174613.1 acylphosphatase -
  R9C51_RS09700 (PC0027_19070) yidC 1872290..1873216 (+) 927 WP_000835941.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=98057 R9C51_RS09665 WP_000727277.1 1867215..1868252(-) (sepM) [Streptococcus pneumoniae strain PZ900700027]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=98057 R9C51_RS09665 WP_000727277.1 1867215..1868252(-) (sepM) [Streptococcus pneumoniae strain PZ900700027]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACGGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGACTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGAAAAAATGGGATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment