Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AAFA12_RS07730 | Genome accession | NZ_CP151696 |
| Coordinates | 1556655..1557035 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836910.1 | Uniprot ID | A0AAQ1AB09 |
| Organism | Acinetobacter baumannii strain F19-10-MH12 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1551655..1562035
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA12_RS07700 (AAFA12_07700) | kdsB | 1552558..1553319 (+) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AAFA12_RS07705 (AAFA12_07705) | - | 1553331..1554311 (+) | 981 | WP_001075418.1 | DNA polymerase III subunit delta' | - |
| AAFA12_RS07710 (AAFA12_07710) | - | 1554323..1554664 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AAFA12_RS07715 (AAFA12_07715) | - | 1554682..1555455 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AAFA12_RS07720 (AAFA12_07720) | - | 1555493..1556101 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AAFA12_RS07725 (AAFA12_07725) | - | 1556111..1556665 (+) | 555 | WP_000841379.1 | type II secretion system protein | - |
| AAFA12_RS07730 (AAFA12_07730) | xcpV | 1556655..1557035 (+) | 381 | WP_000836910.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AAFA12_RS07735 (AAFA12_07735) | xcpW | 1557035..1557736 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AAFA12_RS07740 (AAFA12_07740) | gspK | 1557736..1558695 (+) | 960 | WP_000301481.1 | type II secretion system minor pseudopilin GspK | - |
| AAFA12_RS07745 (AAFA12_07745) | - | 1558925..1559521 (+) | 597 | WP_000908451.1 | 6-carboxytetrahydropterin synthase | - |
| AAFA12_RS07750 (AAFA12_07750) | ung | 1559572..1560285 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AAFA12_RS07755 (AAFA12_07755) | - | 1560282..1561406 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AAFA12_RS07760 (AAFA12_07760) | tadA | 1561413..1561916 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=980036 AAFA12_RS07730 WP_000836910.1 1556655..1557035(+) (xcpV) [Acinetobacter baumannii strain F19-10-MH12]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=980036 AAFA12_RS07730 WP_000836910.1 1556655..1557035(+) (xcpV) [Acinetobacter baumannii strain F19-10-MH12]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |