Detailed information NTG0980037

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AAFA12_RS07735
• Genome accession: NZ_CP151696
• Coordinates: 1557035..1557736 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain F19-10-MH12
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1552035..1562736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFA12_RS07700 (AAFA12_07700)	kdsB	1552558..1553319 (+)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AAFA12_RS07705 (AAFA12_07705)	-	1553331..1554311 (+)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
AAFA12_RS07710 (AAFA12_07710)	-	1554323..1554664 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
AAFA12_RS07715 (AAFA12_07715)	-	1554682..1555455 (+)	774	WP_000497298.1	TatD family hydrolase	-
AAFA12_RS07720 (AAFA12_07720)	-	1555493..1556101 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AAFA12_RS07725 (AAFA12_07725)	-	1556111..1556665 (+)	555	WP_000841379.1	type II secretion system protein	-
AAFA12_RS07730 (AAFA12_07730)	xcpV	1556655..1557035 (+)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
AAFA12_RS07735 (AAFA12_07735)	xcpW	1557035..1557736 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AAFA12_RS07740 (AAFA12_07740)	gspK	1557736..1558695 (+)	960	WP_000301481.1	type II secretion system minor pseudopilin GspK	-
AAFA12_RS07745 (AAFA12_07745)	-	1558925..1559521 (+)	597	WP_000908451.1	6-carboxytetrahydropterin synthase	-
AAFA12_RS07750 (AAFA12_07750)	ung	1559572..1560285 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
AAFA12_RS07755 (AAFA12_07755)	-	1560282..1561406 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AAFA12_RS07760 (AAFA12_07760)	tadA	1561413..1561916 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AAFA12_RS07765 (AAFA12_07765)	-	1561986..1562429 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=980037 AAFA12_RS07735 WP_000594572.1 1557035..1557736(+) (xcpW) [Acinetobacter baumannii strain F19-10-MH12]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=980037 AAFA12_RS07735 WP_000594572.1 1557035..1557736(+) (xcpW) [Acinetobacter baumannii strain F19-10-MH12]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991