Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | AAFA20_RS16945 | Genome accession | NZ_CP151692 |
| Coordinates | 3557327..3557854 (-) | Length | 175 a.a. |
| NCBI ID | WP_000695061.1 | Uniprot ID | A0A506J6X2 |
| Organism | Acinetobacter baumannii strain F19-10-CH6 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3552327..3562854
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA20_RS16925 (AAFA20_16925) | - | 3552516..3553391 (-) | 876 | WP_000218808.1 | hypothetical protein | - |
| AAFA20_RS16930 (AAFA20_16930) | aroB | 3553407..3554489 (-) | 1083 | WP_001194249.1 | 3-dehydroquinate synthase | - |
| AAFA20_RS16935 (AAFA20_16935) | aroK | 3554518..3555087 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| AAFA20_RS16940 (AAFA20_16940) | pilQ | 3555099..3557264 (-) | 2166 | WP_001017029.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| AAFA20_RS16945 (AAFA20_16945) | pilP | 3557327..3557854 (-) | 528 | WP_000695061.1 | pilus assembly protein PilP | Machinery gene |
| AAFA20_RS16950 (AAFA20_16950) | pilO | 3557865..3558605 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AAFA20_RS16955 (AAFA20_16955) | pilN | 3558602..3559243 (-) | 642 | WP_000201221.1 | PilN domain-containing protein | Machinery gene |
| AAFA20_RS16960 (AAFA20_16960) | pilM | 3559243..3560301 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19445.72 Da Isoelectric Point: 8.9898
>NTDB_id=979960 AAFA20_RS16945 WP_000695061.1 3557327..3557854(-) (pilP) [Acinetobacter baumannii strain F19-10-CH6]
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRIIHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRIIHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=979960 AAFA20_RS16945 WP_000695061.1 3557327..3557854(-) (pilP) [Acinetobacter baumannii strain F19-10-CH6]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTATCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTATCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
98.857 |
100 |
0.989 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |