Detailed information NTG0979963

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AAFA20_RS16960
• Genome accession: NZ_CP151692
• Coordinates: 3559243..3560301 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain F19-10-CH6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3554243..3565301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFA20_RS16935 (AAFA20_16935)	aroK	3554518..3555087 (-)	570	WP_000643712.1	shikimate kinase AroK	-
AAFA20_RS16940 (AAFA20_16940)	pilQ	3555099..3557264 (-)	2166	WP_001017029.1	type IV pilus secretin PilQ family protein	Machinery gene
AAFA20_RS16945 (AAFA20_16945)	pilP	3557327..3557854 (-)	528	WP_000695061.1	pilus assembly protein PilP	Machinery gene
AAFA20_RS16950 (AAFA20_16950)	pilO	3557865..3558605 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
AAFA20_RS16955 (AAFA20_16955)	pilN	3558602..3559243 (-)	642	WP_000201221.1	PilN domain-containing protein	Machinery gene
AAFA20_RS16960 (AAFA20_16960)	pilM	3559243..3560301 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
AAFA20_RS16965 (AAFA20_16965)	ponA	3560463..3563018 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
AAFA20_RS16970 (AAFA20_16970)	-	3563036..3563860 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
AAFA20_RS16975 (AAFA20_16975)	-	3563863..3564195 (-)	333	WP_000169599.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=979963 AAFA20_RS16960 WP_002014066.1 3559243..3560301(-) (pilM) [Acinetobacter baumannii strain F19-10-CH6]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=979963 AAFA20_RS16960 WP_002014066.1 3559243..3560301(-) (pilM) [Acinetobacter baumannii strain F19-10-CH6]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGACTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTATCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423