Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | AAFA13_RS02505 | Genome accession | NZ_CP151690 |
| Coordinates | 528107..528589 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046423.1 | Uniprot ID | A0A9E9MD39 |
| Organism | Acinetobacter baumannii strain F19-10-CH8 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 523107..533589
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA13_RS02495 (AAFA13_02495) | pilX | 523410..524228 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AAFA13_RS02500 (AAFA13_02500) | pilY1 | 524240..528094 (+) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| AAFA13_RS02505 (AAFA13_02505) | pilY2 | 528107..528589 (+) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA13_RS02510 (AAFA13_02510) | pilE | 528586..529011 (+) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA13_RS02515 (AAFA13_02515) | rpsP | 529158..529409 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA13_RS02520 (AAFA13_02520) | rimM | 529429..529977 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA13_RS02525 (AAFA13_02525) | trmD | 530023..530763 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA13_RS02530 (AAFA13_02530) | rplS | 530971..531339 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA13_RS02535 (AAFA13_02535) | - | 531392..532333 (-) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA13_RS02540 (AAFA13_02540) | - | 532448..533479 (-) | 1032 | Protein_487 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17575.84 Da Isoelectric Point: 8.4834
>NTDB_id=979892 AAFA13_RS02505 WP_001046423.1 528107..528589(+) (pilY2) [Acinetobacter baumannii strain F19-10-CH8]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=979892 AAFA13_RS02505 WP_001046423.1 528107..528589(+) (pilY2) [Acinetobacter baumannii strain F19-10-CH8]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.125 |
100 |
0.931 |
| comE | Acinetobacter baylyi ADP1 |
38.953 |
100 |
0.419 |