Detailed information NTG0097986

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R8566_RS10430
• Genome accession: NZ_AP026920
• Coordinates: 1998439..1998843 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588005.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700014
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1993439..2003843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8566_RS10395 (PC0014_20480)	rnpA	1993861..1994232 (-)	372	WP_000739241.1	ribonuclease P protein component	-
R8566_RS10400 (PC0014_20490)	-	1994380..1995570 (-)	1191	WP_000167766.1	acetate kinase	-
R8566_RS10405 (PC0014_20500)	comYH	1995621..1996574 (-)	954	WP_000345085.1	class I SAM-dependent methyltransferase	Machinery gene
R8566_RS10410	-	1996635..1997222 (-)	588	Protein_2021	class I SAM-dependent methyltransferase	-
R8566_RS10415 (PC0014_20530)	comGG/cglG	1997359..1997772 (-)	414	WP_000265619.1	competence type IV pilus minor pilin ComGG	Machinery gene
R8566_RS10420 (PC0014_20540)	comGF/cglF	1997750..1998211 (-)	462	WP_000250523.1	competence type IV pilus minor pilin ComGF	Machinery gene
R8566_RS10425 (PC0014_20550)	comGE/cglE	1998174..1998476 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R8566_RS10430 (PC0014_20560)	comGD/cglD	1998439..1998843 (-)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
R8566_RS10435 (PC0014_20570)	comGC/cglC	1998836..1999162 (-)	327	WP_000738638.1	comG operon protein ComGC	Machinery gene
R8566_RS10440 (PC0014_20580)	comGB/cglB	1999164..2000180 (-)	1017	WP_074196785.1	competence type IV pilus assembly protein ComGB	Machinery gene
R8566_RS10445 (PC0014_20590)	comGA/cglA/cilD	2000128..2001069 (-)	942	WP_000249564.1	competence type IV pilus ATPase ComGA	Machinery gene
R8566_RS10450 (PC0014_20600)	-	2001145..2001510 (-)	366	WP_000286415.1	DUF1033 family protein	-
R8566_RS10455 (PC0014_20610)	-	2001661..2002719 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14636.81 Da
• Isoelectric Point: 10.2164

>NTDB_id=97986 R8566_RS10430 WP_000588005.1 1998439..1998843(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700014]
MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=97986 R8566_RS10430 WP_000588005.1 1998439..1998843(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700014]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGCTTTGAGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGTAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478