Detailed information NTG0097986

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ACGHT2_RS10880
• Genome accession: NZ_AP031455
• Coordinates: 2078720..2079814 (+)
• Length: 364 a.a.
• NCBI ID: WP_003067011.1
• Uniprot ID: E0PGK0
• Organism: Streptococcus pasteurianus strain k46-0107-A9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2073720..2084814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGHT2_RS10855 (K460107A9_20450)	pgsA	2074149..2074703 (-)	555	WP_003066999.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ACGHT2_RS10860 (K460107A9_20460)	-	2074712..2075653 (-)	942	WP_003067002.1	helix-turn-helix domain-containing protein	-
ACGHT2_RS10865 (K460107A9_20470)	yfmH	2075717..2077006 (-)	1290	WP_270619766.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
ACGHT2_RS10870 (K460107A9_20480)	yfmF	2077007..2078251 (-)	1245	WP_270619765.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
ACGHT2_RS10875 (K460107A9_20490)	yaaA	2078340..2078717 (+)	378	WP_270619764.1	S4 domain-containing protein YaaA	-
ACGHT2_RS10880 (K460107A9_20500)	recF	2078720..2079814 (+)	1095	WP_003067011.1	DNA replication/repair protein RecF	Machinery gene
ACGHT2_RS10885 (K460107A9_20510)	-	2079876..2080742 (-)	867	WP_003067013.1	GRP family sugar transporter	-
ACGHT2_RS10890 (K460107A9_20520)	guaB	2080982..2082463 (-)	1482	WP_003067014.1	IMP dehydrogenase	-
ACGHT2_RS10895 (K460107A9_20530)	trpS	2082722..2083744 (-)	1023	WP_013852368.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41782.80 Da
• Isoelectric Point: 6.8963

>NTDB_id=97986 ACGHT2_RS10880 WP_003067011.1 2078720..2079814(+) (recF) [Streptococcus pasteurianus strain k46-0107-A9]
MWIQKITLKNYRNYLTSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKELIHFDAKELLVSGILQRSSGT
VPLDISLSSKGRVTKVNHLKQAKLSDYIGVMTVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLADLSNYNHVLKQR
NTYLKTAEKVDTDFLAVLDEQLADFGSRVMEHRLDFISNLEKEADRYHYAISNGIEHLSIHYLSSVSFQEKDDIKPNFLK
ALQKNQQRDIFKKNTSVGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIRTVTGDYPILLLDDVMSELDNYRQ
TELLKMIIDKNVQTFITTTSLDHLSQLPDDLKIFTVNQGNIQEN

Nucleotide

• Length: 1095 bp

>NTDB_id=97986 ACGHT2_RS10880 WP_003067011.1 2078720..2079814(+) (recF) [Streptococcus pasteurianus strain k46-0107-A9]
ATGTGGATTCAAAAAATAACGTTAAAAAATTATCGTAACTATCTGACTAGTGAGCTTGAATTTTCTCCTGGACTTAATGT
TTTCATCGGAAAAAACGCTCAAGGAAAGACAAATTTCTTAGAAGCAATTTATTTCCTTTCTCTTACCCGCAGCCACCGCA
CACGAACAGACAAAGAGTTGATTCATTTTGATGCCAAAGAACTTCTGGTTTCTGGTATTTTACAACGTTCAAGTGGTACT
GTTCCTTTAGATATTAGTCTTTCAAGTAAGGGACGTGTTACAAAAGTTAATCATCTAAAACAAGCTAAGTTATCAGACTA
TATTGGTGTAATGACCGTTGTTCTTTTTGCACCTGAAGATTTACAACTCATCAAAGGCGCTCCAAGCCTTCGTCGAAAAT
TTATTGACATTGATTTAGGGCAAATAAAGCCGATTTATTTAGCTGATTTGTCTAATTATAACCACGTGCTAAAACAGCGT
AATACTTATCTTAAAACGGCTGAAAAAGTTGATACTGATTTTTTAGCTGTGCTTGATGAGCAATTAGCTGATTTTGGTAG
CCGTGTCATGGAACATCGTTTAGATTTCATTTCTAATTTAGAAAAAGAAGCCGACCGCTATCATTATGCCATTTCAAACG
GCATTGAACATCTTAGTATCCATTATCTGTCATCTGTTTCCTTCCAAGAAAAGGATGACATTAAGCCAAACTTCTTAAAA
GCTTTACAGAAAAATCAGCAGCGTGATATTTTCAAAAAAAATACAAGTGTTGGTCCTCACCGCGATGATTTGGAATTTTT
CATCAATGATATGCCAGCAAATTTTGGTAGCCAAGGTCAGCACCGTAGCTTAATCTTATCACTAAAAATGGCTGAAATTG
AGTTAATAAGAACAGTAACTGGTGATTATCCTATTTTGCTTTTAGATGATGTCATGAGCGAGCTTGATAATTACAGACAA
ACCGAACTCTTAAAAATGATTATTGATAAAAACGTTCAAACCTTCATTACAACAACGAGTCTCGACCACCTATCGCAGCT
TCCGGACGACTTAAAAATCTTTACAGTTAATCAAGGTAACATTCAAGAAAATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: E0PGK0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.11	100	0.651
recF	Bacillus subtilis subsp. subtilis str. 168	46.705	95.879	0.448