Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   AADZ70_RS07305 Genome accession   NZ_CP151679
Coordinates   1499754..1500554 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus sp. YBsi01     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1494754..1505554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADZ70_RS07275 (AADZ70_07275) - 1495294..1495926 (+) 633 WP_188154552.1 helix-turn-helix domain-containing protein -
  AADZ70_RS07280 (AADZ70_07280) - 1496213..1496356 (+) 144 WP_223152353.1 hypothetical protein -
  AADZ70_RS07285 (AADZ70_07285) - 1496450..1497568 (+) 1119 WP_016939012.1 NADH-dependent flavin oxidoreductase -
  AADZ70_RS07290 (AADZ70_07290) - 1497694..1497906 (+) 213 WP_327815271.1 spore germination protein -
  AADZ70_RS07295 (AADZ70_07295) - 1498031..1498243 (+) 213 WP_016939010.1 spore germination protein -
  AADZ70_RS07300 (AADZ70_07300) alr 1498429..1499610 (+) 1182 WP_016939009.1 alanine racemase -
  AADZ70_RS07305 (AADZ70_07305) spo0A 1499754..1500554 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  AADZ70_RS07310 (AADZ70_07310) spoIVB 1500834..1502114 (-) 1281 WP_198697863.1 SpoIVB peptidase -
  AADZ70_RS07315 (AADZ70_07315) recN 1502278..1504008 (-) 1731 WP_049626999.1 DNA repair protein RecN Machinery gene
  AADZ70_RS07320 (AADZ70_07320) argR 1504040..1504489 (-) 450 WP_003153173.1 transcriptional regulator ArgR -
  AADZ70_RS07325 (AADZ70_07325) - 1504586..1505431 (-) 846 WP_016939006.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=979677 AADZ70_RS07305 WP_003153177.1 1499754..1500554(-) (spo0A) [Bacillus sp. YBsi01]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=979677 AADZ70_RS07305 WP_003153177.1 1499754..1500554(-) (spo0A) [Bacillus sp. YBsi01]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTAATCGGCGTTGCTTATAACGGGCAGGAATGTCTTTCTTTGTTTAAAGATAAAAATCCCGATGTGCTCG
TTTTAGATATTATTATGCCGCATCTGGACGGACTGGCGGTTTTGGAGCGGCTCCGTGAATCAGAGCTTGAGAAACAGCCG
AACGTTATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGCGTCACACACCGTGCGC
CGTCTGCACAAAGCAGCATCATTCGCAGCCAGCCGGAGCCGAAACGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATTAAAGGCTATCTTTATTTGCGGGAAGCCATTTCCATGGTGTACAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCGATTGAAGTCGCTTGGAGCAGGGGAAATATTGATTCCATTTCTTCGCTGTTCGGGTATACCGTAAGC
ATGACAAAAGCAAAACCAACCAACTCAGAATTCATTGCGATGGTTGCTGACAAGCTGAGATTAGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97

Multiple sequence alignment