Detailed information
Bioinformatically predicted
Overview
| Name | hapR | Type | Regulator |
| Locus tag | AAC977_RS02545 | Genome accession | NZ_CP151640 |
| Coordinates | 549787..550407 (-) | Length | 206 a.a. |
| NCBI ID | WP_021020566.1 | Uniprot ID | A0A1M5CKH9 |
| Organism | Vibrio gazogenes strain DSM 21264 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
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Genomic Context
Location: 544787..555407
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAC977_RS02535 (AAC977_02525) | aceF | 546109..547992 (+) | 1884 | WP_072960052.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| AAC977_RS02540 (AAC977_02530) | lpdA | 548238..549662 (+) | 1425 | WP_072960050.1 | dihydrolipoyl dehydrogenase | - |
| AAC977_RS02545 (AAC977_02535) | hapR | 549787..550407 (-) | 621 | WP_021020566.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| AAC977_RS02550 (AAC977_02540) | hpt | 550832..551365 (+) | 534 | WP_072960047.1 | hypoxanthine phosphoribosyltransferase | - |
| AAC977_RS02555 (AAC977_02545) | can | 551463..552131 (-) | 669 | WP_072960044.1 | carbonate dehydratase | - |
| AAC977_RS02560 (AAC977_02550) | - | 552552..553535 (+) | 984 | WP_072960041.1 | ABC transporter ATP-binding protein | - |
| AAC977_RS02565 (AAC977_02555) | - | 553549..554319 (+) | 771 | WP_072960039.1 | ABC transporter permease | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 24135.49 Da Isoelectric Point: 6.2222
>NTDB_id=979416 AAC977_RS02545 WP_021020566.1 549787..550407(-) (hapR) [Vibrio gazogenes strain DSM 21264]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVHQFSNFL
ADNIDVDSYIKDNLYHLTHKMTKLVFEDCHWLKVWFEWSASTRDEVWPLFVSTNHTNRLLVKNMFTNAIERGDVSDHYDP
EHLVTLFLGIFYSLFVQVNRLQDQKEIDDLVNSYLDMLCIYNNRRA
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVHQFSNFL
ADNIDVDSYIKDNLYHLTHKMTKLVFEDCHWLKVWFEWSASTRDEVWPLFVSTNHTNRLLVKNMFTNAIERGDVSDHYDP
EHLVTLFLGIFYSLFVQVNRLQDQKEIDDLVNSYLDMLCIYNNRRA
Nucleotide
Download Length: 621 bp
>NTDB_id=979416 AAC977_RS02545 WP_021020566.1 549787..550407(-) (hapR) [Vibrio gazogenes strain DSM 21264]
ATGGACGCTTCAATAGAAAAACGCCCTCGTACACGATTATCACCTCAGAAACGTAAACTTCAGCTGATGGAAATTGCGCT
TGAAGTCTTCGCCAAACGGGGTATCGGACGTGGTGGACATGCAGATATCGCTGAAATTGCTCAGGTATCTGTCGCAACTG
TATTTAACTATTTCCCAACTCGTGAGGATTTAGTTGATGATGTTCTCACTCACGTCGTTCACCAGTTCTCAAACTTCCTC
GCAGACAACATCGATGTCGATAGTTATATCAAAGATAATCTCTATCATCTGACACATAAAATGACAAAACTGGTCTTTGA
AGATTGTCATTGGCTGAAAGTGTGGTTTGAATGGAGTGCATCGACCCGCGACGAAGTCTGGCCGTTATTCGTATCGACCA
ACCATACAAACCGTCTGTTGGTAAAAAATATGTTTACCAATGCAATCGAACGCGGCGATGTCAGCGATCATTATGATCCT
GAACATTTAGTCACGCTGTTCCTCGGAATTTTCTATTCCCTGTTTGTACAAGTGAACCGTTTACAAGATCAAAAAGAGAT
CGATGATCTCGTGAACAGCTACTTGGACATGTTATGCATTTATAACAACCGTCGGGCTTAA
ATGGACGCTTCAATAGAAAAACGCCCTCGTACACGATTATCACCTCAGAAACGTAAACTTCAGCTGATGGAAATTGCGCT
TGAAGTCTTCGCCAAACGGGGTATCGGACGTGGTGGACATGCAGATATCGCTGAAATTGCTCAGGTATCTGTCGCAACTG
TATTTAACTATTTCCCAACTCGTGAGGATTTAGTTGATGATGTTCTCACTCACGTCGTTCACCAGTTCTCAAACTTCCTC
GCAGACAACATCGATGTCGATAGTTATATCAAAGATAATCTCTATCATCTGACACATAAAATGACAAAACTGGTCTTTGA
AGATTGTCATTGGCTGAAAGTGTGGTTTGAATGGAGTGCATCGACCCGCGACGAAGTCTGGCCGTTATTCGTATCGACCA
ACCATACAAACCGTCTGTTGGTAAAAAATATGTTTACCAATGCAATCGAACGCGGCGATGTCAGCGATCATTATGATCCT
GAACATTTAGTCACGCTGTTCCTCGGAATTTTCTATTCCCTGTTTGTACAAGTGAACCGTTTACAAGATCAAAAAGAGAT
CGATGATCTCGTGAACAGCTACTTGGACATGTTATGCATTTATAACAACCGTCGGGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hapR | Vibrio cholerae C6706 |
73.892 |
98.544 |
0.728 |
| hapR | Vibrio cholerae strain A1552 |
73.892 |
98.544 |
0.728 |
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
75.377 |
96.602 |
0.728 |