Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   ACGHT2_RS05335 Genome accession   NZ_AP031455
Coordinates   1007804..1008466 (-) Length   220 a.a.
NCBI ID   WP_172456417.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1002804..1013466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS05315 (K460107A9_09660) ffh 1003143..1004708 (+) 1566 WP_003064717.1 signal recognition particle protein -
  ACGHT2_RS05320 (K460107A9_09670) xerS 1004919..1005989 (+) 1071 WP_013851816.1 tyrosine recombinase XerS Machinery gene
  ACGHT2_RS05325 (K460107A9_09680) - 1006096..1006776 (-) 681 WP_013851817.1 XRE family transcriptional regulator -
  ACGHT2_RS05330 (K460107A9_09690) - 1006860..1007807 (-) 948 WP_003064734.1 HAMP domain-containing sensor histidine kinase -
  ACGHT2_RS05335 (K460107A9_09700) braR 1007804..1008466 (-) 663 WP_172456417.1 response regulator transcription factor Regulator
  ACGHT2_RS05340 (K460107A9_09710) - 1008554..1010533 (-) 1980 WP_390578596.1 FtsX-like permease family protein -
  ACGHT2_RS05345 (K460107A9_09720) - 1010535..1011287 (-) 753 WP_003064738.1 ABC transporter ATP-binding protein -
  ACGHT2_RS05350 (K460107A9_09730) - 1011791..1012102 (-) 312 WP_058692308.1 hypothetical protein -

Sequence


Protein


Download         Length: 220 a.a.        Molecular weight: 25457.13 Da        Isoelectric Point: 4.9715

>NTDB_id=97939 ACGHT2_RS05335 WP_172456417.1 1007804..1008466(-) (braR) [Streptococcus pasteurianus strain k46-0107-A9]
MKQGKIYIVEDDETIVKLLKQHLSQTYDVFSVTNFRAIKQEVEEIKPDLILIDITLPYFNGFYWTTEIRKSMTLPIIFIS
SSDDEMDTVMALNMGGDDFVSKPFSLTILDAKISAFLRRAYQFTSDNYQLEHFSLSRDGILSNGDDHITLSPTENKILAI
LFEHQNQVVPKEELLEKLWENESFIDQNTLSVNITRLRKKTQPLGFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=97939 ACGHT2_RS05335 WP_172456417.1 1007804..1008466(-) (braR) [Streptococcus pasteurianus strain k46-0107-A9]
ATGAAACAAGGAAAGATTTATATTGTCGAGGACGATGAAACTATCGTTAAACTTTTAAAACAACATCTTAGTCAAACTTA
TGATGTCTTTAGTGTCACTAATTTTCGAGCTATCAAGCAGGAAGTCGAAGAAATCAAACCTGACCTTATCTTGATTGATA
TCACGTTGCCATATTTTAATGGTTTTTATTGGACAACAGAAATTCGTAAAAGCATGACATTGCCGATTATTTTTATCTCA
TCTAGTGATGATGAAATGGATACTGTCATGGCACTTAATATGGGAGGAGATGATTTTGTGTCAAAGCCATTTTCTCTAAC
GATTTTAGATGCCAAAATTTCAGCTTTTTTAAGGCGTGCTTACCAGTTTACCTCGGATAATTACCAATTAGAACATTTTT
CTCTATCACGTGACGGGATTTTGTCAAACGGTGACGACCATATCACCCTATCTCCAACAGAAAATAAGATTTTAGCAATT
CTCTTTGAACATCAAAATCAAGTCGTTCCCAAAGAGGAATTACTCGAGAAGCTTTGGGAAAATGAAAGTTTCATTGACCA
AAACACCCTTAGTGTTAACATAACACGACTCCGCAAGAAAACACAACCATTAGGTTTCGATCGTATTCACACCGTGAGAG
GAGTTGGCTACCTTCTAAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.872

99.091

0.455


Multiple sequence alignment