Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   AAEO79_RS03820 Genome accession   NZ_CP151540
Coordinates   777176..778993 (+) Length   605 a.a.
NCBI ID   WP_379946625.1    Uniprot ID   -
Organism   Enterococcus devriesei strain Ed-CK-24     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 772176..783993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEO79_RS03795 (AAEO79_03785) - 772384..773103 (-) 720 WP_379946621.1 HAD family hydrolase -
  AAEO79_RS03800 (AAEO79_03790) spxA 773957..774355 (+) 399 WP_071863184.1 transcriptional regulator SpxA -
  AAEO79_RS03805 (AAEO79_03795) - 774444..775049 (-) 606 WP_379946622.1 HAD family hydrolase -
  AAEO79_RS03810 (AAEO79_03800) - 775266..775910 (+) 645 WP_379946623.1 adaptor protein MecA -
  AAEO79_RS03815 (AAEO79_03805) - 776011..776994 (+) 984 WP_379946624.1 competence protein CoiA -
  AAEO79_RS03820 (AAEO79_03810) pepF 777176..778993 (+) 1818 WP_379946625.1 oligoendopeptidase F Regulator
  AAEO79_RS03825 (AAEO79_03815) - 779332..780510 (+) 1179 WP_216429657.1 class C sortase -
  AAEO79_RS03830 (AAEO79_03820) - 780512..781687 (+) 1176 WP_379946626.1 class C sortase -
  AAEO79_RS03835 (AAEO79_03825) - 781729..782376 (-) 648 WP_071863190.1 DsbA family protein -
  AAEO79_RS03840 (AAEO79_03830) - 782373..782981 (-) 609 WP_379946627.1 CYTH domain-containing protein -
  AAEO79_RS03845 (AAEO79_03835) - 783183..783848 (+) 666 WP_216429660.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 69302.93 Da        Isoelectric Point: 4.6517

>NTDB_id=979021 AAEO79_RS03820 WP_379946625.1 777176..778993(+) (pepF) [Enterococcus devriesei strain Ed-CK-24]
MSEAKQLPRRQEIPAELTWDLTKIFADDAAFEKEFQSLSAELSKVTEIKGTLHQGAVDFLTAIEYVLDIYRKAEVIYVYA
HLKNDEDTANATNQALYARASSLIAQVSEAVSWFEPEMLQLSDDAIWNYFEVEPKLELYRHFVEQIISERAHILPAEQEA
LLAGASEIFGSASDTFSIMNNADLKFPVVKNEAGEDVQLTHGVYGQLLESTDRKVREQAFKALYSVYHQFRNTFASTLSA
HVKNHNYKAKVRGYSSARAAALSGNHIPEDVYETLTLVVNQYLPLLHRYVELRKELLELEDLHMYDLYTPLLAEAPIKYT
YEEAQAKALEALKPLGEDYLSVVKKAFAERWIDVVENQGKRSGAYSSGAYDTQPYILLNWHDRLDELYTLVHEMGHSVHS
YFTRSTQPYVYGDYSIFLAEIASTTNENILTSYLLQTEKDPKVRAYIINHFLDGFKGTIFRQTQFAEFEHFIHTADAAGD
PLTSEYLSKYYGELNAKYYGPIVINDEEIKDEWSRIPHFYYNYYVYQYATGFSAAIALSKRIVEGEPEALEKYLTYLKSG
SSDYPIEVMKRAGVDMTQPAYIEDAMEVFALRLDELEELVAELKQ

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=979021 AAEO79_RS03820 WP_379946625.1 777176..778993(+) (pepF) [Enterococcus devriesei strain Ed-CK-24]
ATGAGTGAAGCAAAACAATTGCCAAGACGTCAAGAGATTCCAGCTGAATTGACCTGGGACCTAACGAAAATCTTTGCGGA
TGATGCGGCCTTTGAAAAGGAGTTTCAGTCTCTATCTGCAGAATTATCTAAAGTCACGGAGATCAAAGGAACACTGCATC
AAGGAGCCGTGGATTTTCTTACAGCGATCGAATATGTCTTAGATATCTATCGTAAAGCTGAAGTTATTTACGTATATGCC
CATTTAAAAAATGATGAGGATACAGCGAATGCGACGAATCAAGCGCTCTATGCTCGCGCGTCTAGCTTGATCGCCCAAGT
CAGTGAAGCAGTCAGCTGGTTTGAACCGGAAATGCTGCAACTTTCTGATGATGCGATTTGGAATTATTTTGAAGTGGAAC
CGAAACTTGAATTGTATCGTCATTTTGTTGAACAGATCATTTCGGAAAGAGCGCACATTTTACCAGCAGAACAGGAAGCA
TTGCTGGCTGGCGCCAGTGAGATTTTTGGCAGTGCATCAGACACGTTTTCAATTATGAACAACGCGGACTTAAAATTCCC
AGTTGTTAAAAATGAAGCCGGTGAAGATGTTCAATTAACGCATGGTGTCTATGGTCAGCTGTTGGAAAGTACGGACCGAA
AAGTCAGGGAGCAAGCTTTTAAGGCCTTGTATTCAGTCTATCATCAATTCCGAAATACCTTCGCTTCGACCTTGAGCGCT
CACGTGAAGAATCATAATTACAAAGCTAAGGTACGGGGATATTCTTCTGCTCGCGCGGCGGCGCTAAGCGGGAATCACAT
TCCGGAAGATGTCTATGAGACGCTGACTTTAGTGGTCAACCAATACTTACCGTTATTGCATCGCTATGTTGAACTGCGGA
AGGAATTGTTAGAACTTGAAGACTTGCATATGTACGATCTATATACGCCGCTTTTAGCAGAAGCTCCGATTAAATATACT
TATGAAGAAGCCCAAGCCAAAGCACTTGAAGCGCTGAAACCACTAGGAGAAGATTATTTAAGTGTGGTAAAAAAAGCCTT
CGCTGAACGTTGGATCGATGTCGTTGAAAACCAAGGGAAACGTAGTGGCGCTTATTCTTCAGGCGCTTATGATACCCAGC
CTTATATTTTATTAAATTGGCATGATCGTTTAGACGAGTTGTATACTTTAGTCCACGAAATGGGTCACAGTGTTCACAGC
TATTTCACTCGCAGCACTCAACCCTATGTTTACGGGGATTATTCGATTTTCTTAGCAGAGATCGCTTCGACTACCAATGA
AAATATTTTAACTAGTTATTTACTACAAACGGAGAAAGATCCGAAGGTCCGCGCCTATATCATCAATCATTTCCTTGATG
GCTTTAAGGGCACGATTTTCCGTCAGACACAGTTTGCGGAATTTGAACATTTTATTCACACCGCTGATGCAGCAGGTGAT
CCATTGACCAGTGAATATCTAAGCAAATATTACGGTGAGCTGAACGCAAAATATTATGGCCCAATCGTGATCAATGATGA
AGAAATCAAGGATGAATGGTCACGGATTCCGCATTTCTACTATAACTATTACGTGTATCAATATGCGACGGGTTTTTCAG
CAGCGATTGCTTTGTCAAAACGAATTGTTGAAGGAGAGCCTGAGGCCTTAGAAAAATATTTGACTTATTTGAAATCGGGC
AGTAGCGATTATCCGATCGAAGTTATGAAGCGGGCCGGCGTCGATATGACCCAGCCAGCGTATATCGAAGATGCGATGGA
AGTTTTCGCTTTACGTCTCGATGAATTAGAGGAATTAGTAGCAGAATTAAAACAATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(207-587)

Oligopeptidase F (Peptidase_M3_N)

(117-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

55.236

97.851

0.54

Multiple sequence alignment