Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   MGAS38345_RS06400 Genome accession   NZ_CP151437
Coordinates   1244082..1245119 (-) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes strain MGAS38345     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1239082..1250119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS38345_RS06380 (MGAS38345_02614) - 1239833..1240459 (+) 627 WP_010922497.1 A24 family peptidase -
  MGAS38345_RS06385 (MGAS38345_02616) rlmN 1240541..1241620 (-) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  MGAS38345_RS06390 (MGAS38345_02618) - 1241624..1242244 (-) 621 WP_011285637.1 YutD family protein -
  MGAS38345_RS06395 (MGAS38345_02620) - 1242692..1243668 (-) 977 Protein_1214 LacI family DNA-binding transcriptional regulator -
  MGAS38345_RS06400 (MGAS38345_02624) sepM 1244082..1245119 (-) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  MGAS38345_RS06405 (MGAS38345_02626) coaD 1245106..1245597 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  MGAS38345_RS06410 (MGAS38345_02628) rsmD 1245587..1246126 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  MGAS38345_RS06415 (MGAS38345_02630) asnA 1246249..1247241 (-) 993 WP_010922500.1 aspartate--ammonia ligase -
  MGAS38345_RS06420 (MGAS38345_02632) arcC 1247554..1248504 (-) 951 WP_010922501.1 carbamate kinase -
  MGAS38345_RS06425 (MGAS38345_02634) - 1248524..1249855 (-) 1332 WP_011285641.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=976767 MGAS38345_RS06400 WP_010922499.1 1244082..1245119(-) (sepM) [Streptococcus pyogenes strain MGAS38345]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=976767 MGAS38345_RS06400 WP_010922499.1 1244082..1245119(-) (sepM) [Streptococcus pyogenes strain MGAS38345]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGCTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment