Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AADV58_RS02995 Genome accession   NZ_CP151406
Coordinates   611129..611506 (+) Length   125 a.a.
NCBI ID   WP_051295196.1    Uniprot ID   -
Organism   Azonexus hydrophilus strain NCP973     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 606129..616506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADV58_RS02970 (AADV58_02970) mgtE 606361..607803 (+) 1443 WP_028993652.1 magnesium transporter -
  AADV58_RS02975 (AADV58_02975) sugE 607804..608142 (-) 339 WP_028993651.1 quaternary ammonium compound efflux SMR transporter SugE -
  AADV58_RS02980 (AADV58_02980) hemL 608139..609422 (-) 1284 WP_341744043.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AADV58_RS02985 (AADV58_02985) thiE 609419..610054 (-) 636 WP_341744044.1 thiamine phosphate synthase -
  AADV58_RS02990 (AADV58_02990) - 610041..610904 (-) 864 WP_028993648.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  AADV58_RS02995 (AADV58_02995) pilG 611129..611506 (+) 378 WP_051295196.1 response regulator Regulator
  AADV58_RS03000 (AADV58_03000) - 611521..611886 (+) 366 WP_028993647.1 response regulator -
  AADV58_RS03005 (AADV58_03005) - 611892..612404 (+) 513 WP_028993646.1 chemotaxis protein CheW -
  AADV58_RS03010 (AADV58_03010) - 612444..614570 (+) 2127 WP_028993645.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 13802.95 Da        Isoelectric Point: 6.9234

>NTDB_id=976437 AADV58_RS02995 WP_051295196.1 611129..611506(+) (pilG) [Azonexus hydrophilus strain NCP973]
MVIDDSNTIRRSAEIFLVQAGCQVVLAEDGFDALAKIADHQPAVVFCDIMMPRLDGYQTCALIKKNPRFKTTPVIMLSSK
DGLFDRARGRMVGSDQYLTKPFTKDSLLQTVATFALPAETQTTQS

Nucleotide


Download         Length: 378 bp        

>NTDB_id=976437 AADV58_RS02995 WP_051295196.1 611129..611506(+) (pilG) [Azonexus hydrophilus strain NCP973]
ATGGTCATCGACGACAGCAACACGATACGCCGGAGCGCCGAGATATTTCTCGTCCAGGCCGGCTGTCAGGTCGTGCTCGC
CGAGGATGGATTCGACGCCCTGGCCAAGATTGCCGACCACCAGCCGGCCGTGGTGTTTTGCGACATCATGATGCCCCGGC
TTGACGGTTATCAGACCTGCGCACTGATCAAGAAAAACCCCCGCTTCAAGACCACGCCGGTGATCATGCTGTCGTCCAAG
GACGGCCTGTTCGACCGGGCGCGCGGGCGCATGGTCGGGTCCGATCAGTACCTGACCAAACCCTTCACCAAGGACAGCCT
GCTGCAAACGGTCGCGACCTTTGCACTGCCGGCGGAAACACAAACCACACAGTCGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.568

88.8

0.6
  pilH Synechocystis sp. PCC 6803

41.441

88.8

0.368

Multiple sequence alignment