Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACM3H0_RS05975 Genome accession   NZ_CP180685
Coordinates   1117742..1118476 (-) Length   244 a.a.
NCBI ID   WP_000589158.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain M14     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1112742..1123476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM3H0_RS05960 (ACM3H0_05960) proB 1113597..1114400 (-) 804 WP_000820352.1 glutamate 5-kinase -
  ACM3H0_RS05965 (ACM3H0_05965) - 1114541..1115926 (+) 1386 WP_000085847.1 PTS transporter subunit EIIC -
  ACM3H0_RS05970 (ACM3H0_05970) - 1116134..1117738 (-) 1605 WP_416055424.1 ABC transporter permease -
  ACM3H0_RS05975 (ACM3H0_05975) pptA 1117742..1118476 (-) 735 WP_000589158.1 ABC transporter ATP-binding protein Regulator
  ACM3H0_RS05980 (ACM3H0_05980) - 1118496..1118801 (-) 306 WP_000711205.1 bacteriocin immunity protein -
  ACM3H0_RS05985 (ACM3H0_05985) recP/tkt 1119014..1120999 (-) 1986 WP_000141871.1 transketolase Machinery gene
  ACM3H0_RS05990 (ACM3H0_05990) - 1121124..1122554 (-) 1431 WP_001217287.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27546.69 Da        Isoelectric Point: 4.6741

>NTDB_id=976029 ACM3H0_RS05975 WP_000589158.1 1117742..1118476(-) (pptA) [Streptococcus agalactiae strain M14]
MIKFEHVSKVYGEKEALSDLTLSIKDGEIFGLIGHNGAGKTTTISILTSIIDATYGQVYIDDLLLTEHRDQIKKKIGYVP
DSPDIFLNLTAEEYWYFLAKIYDVAPEDIEARITKLVDIFELEEQRYNPIESFSHGMRQKVIVIGALLPNPDIWILDEPL
TGLDPQASFDLKEMMKEHAKNGKTVIFSTHVLAVAEQLCDRIGILKQGKLIFVGSLGELKMQYPDKDLETIYLELAGRQA
NREG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=976029 ACM3H0_RS05975 WP_000589158.1 1117742..1118476(-) (pptA) [Streptococcus agalactiae strain M14]
ATGATTAAGTTTGAACATGTTTCGAAAGTATACGGGGAAAAAGAAGCTCTCAGTGATTTAACCCTCTCTATTAAAGATGG
TGAGATTTTTGGATTAATAGGTCACAATGGAGCAGGAAAAACAACGACAATTAGTATTCTAACATCTATTATTGATGCAA
CTTATGGCCAAGTCTATATTGATGACCTACTTTTGACAGAACATCGTGACCAAATTAAGAAAAAAATAGGTTATGTACCG
GACTCGCCAGATATTTTCTTAAATTTAACCGCAGAGGAATACTGGTACTTTTTAGCTAAAATTTATGACGTTGCCCCAGA
AGATATTGAAGCACGTATCACAAAATTGGTAGACATATTTGAACTAGAGGAGCAACGCTATAATCCTATTGAAAGTTTTT
CACATGGTATGCGTCAAAAAGTCATTGTTATAGGTGCCCTTCTTCCAAATCCTGACATTTGGATTCTAGATGAGCCGTTA
ACTGGTTTAGACCCTCAAGCTTCTTTTGATTTGAAAGAAATGATGAAAGAACATGCTAAAAATGGAAAAACAGTTATTTT
TTCAACACATGTTTTAGCAGTTGCAGAACAGTTATGCGACAGAATAGGTATTTTGAAACAAGGGAAATTAATCTTTGTCG
GTAGCTTAGGTGAGTTAAAAATGCAATATCCAGATAAAGATTTGGAAACTATCTATTTGGAATTAGCAGGACGTCAAGCT
AATAGGGAGGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

38.655

97.541

0.377
  pptA Streptococcus salivarius strain HSISS4

38.235

97.541

0.373