Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   AADP85_RS04900 Genome accession   NZ_CP151185
Coordinates   1018825..1019394 (-) Length   189 a.a.
NCBI ID   WP_000287261.1    Uniprot ID   A0A7U7JTQ7
Organism   Staphylococcus argenteus strain Dubai-30     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1013825..1024394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADP85_RS04880 (AADP85_04880) - 1015328..1016686 (+) 1359 WP_000021861.1 TrkH family potassium uptake protein -
  AADP85_RS04885 (AADP85_04885) - 1016825..1018333 (+) 1509 WP_031787352.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  AADP85_RS04900 (AADP85_04900) comK/comK1 1018825..1019394 (-) 570 WP_000287261.1 competence protein ComK Regulator
  AADP85_RS04905 (AADP85_04905) - 1019604..1019822 (+) 219 WP_000876831.1 IDEAL domain-containing protein -
  AADP85_RS04910 (AADP85_04910) - 1019903..1020889 (-) 987 WP_000668810.1 lipoate--protein ligase -
  AADP85_RS04915 (AADP85_04915) - 1021084..1021260 (+) 177 WP_000214898.1 YkvS family protein -
  AADP85_RS04920 (AADP85_04920) - 1021275..1021877 (+) 603 WP_031787353.1 CPBP family glutamic-type intramembrane protease -
  AADP85_RS04925 (AADP85_04925) - 1022796..1022864 (+) 69 WP_225995266.1 hypothetical protein -
  AADP85_RS04930 (AADP85_04930) - 1022888..1023169 (+) 282 Protein_959 lactococcin 972 family bacteriocin -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22637.86 Da        Isoelectric Point: 9.6092

>NTDB_id=975706 AADP85_RS04900 WP_000287261.1 1018825..1019394(-) (comK/comK1) [Staphylococcus argenteus strain Dubai-30]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQHENIWLNMHYIENIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMVS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=975706 AADP85_RS04900 WP_000287261.1 1018825..1019394(-) (comK/comK1) [Staphylococcus argenteus strain Dubai-30]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGATGATCAAAGAAA
TGGTAGTGAAATTATCCGGTTTGATAAAACGCGTATACAAAATCCATTTAAAGTCCAGAAAATCATAGAACGCTCTTGCA
AATTTTATGGTAATACATACCTTGGCAAGAAAGCAGAAACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCCTTATTTCCAACTTATTTTTTCCCAACTCATTCTGACAGACAACACGAAAACATTTGGCTAAATATGCATTA
TATAGAAAATATTAAAGAATTAAAAAATCGTAAATGTAAAGTAACTTTTATTAATAACGAATCAATTATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTACTATATGGTAGATAAACAATCTCGTATGGTTTCT
AAAAATCCCGATCAACCTATAGATTATAATAAAGCCACATTAAACGTATTTGAAGCATTAACACGTTATTCCCTATTCGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7JTQ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

98.413

100

0.984

  comK/comK1 Staphylococcus aureus N315

98.413

100

0.984


Multiple sequence alignment