Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   AAC899_RS14325 Genome accession   NZ_CP151168
Coordinates   3032244..3034475 (+) Length   743 a.a.
NCBI ID   WP_151752748.1    Uniprot ID   -
Organism   Acinetobacter soli strain HY24     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3027244..3039475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC899_RS14300 (AAC899_14300) - 3027309..3028148 (+) 840 WP_004932593.1 CBS domain-containing protein -
  AAC899_RS14305 (AAC899_14305) lnt 3028145..3029707 (+) 1563 WP_216197840.1 apolipoprotein N-acyltransferase -
  AAC899_RS14310 (AAC899_14310) - 3029747..3030133 (-) 387 WP_228267176.1 hypothetical protein -
  AAC899_RS14315 (AAC899_14315) gspG 3030354..3030881 (-) 528 WP_048763888.1 type II secretion system major pseudopilin GspG -
  AAC899_RS14320 (AAC899_14320) gspF 3030900..3032105 (-) 1206 WP_004932582.1 type II secretion system inner membrane protein GspF -
  AAC899_RS14325 (AAC899_14325) priA 3032244..3034475 (+) 2232 WP_151752748.1 primosomal protein N' Machinery gene
  AAC899_RS14330 (AAC899_14330) - 3034548..3036389 (+) 1842 WP_218262251.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  AAC899_RS14335 (AAC899_14335) - 3036440..3037315 (+) 876 WP_004943908.1 Hsp33 family molecular chaperone HslO -
  AAC899_RS14340 (AAC899_14340) - 3037516..3038457 (+) 942 WP_218262252.1 DnaJ C-terminal domain-containing protein -
  AAC899_RS14345 (AAC899_14345) - 3038469..3038828 (+) 360 WP_004932565.1 chaperone modulator CbpM -
  AAC899_RS14350 (AAC899_14350) crcB 3038816..3039199 (-) 384 WP_004932562.1 fluoride efflux transporter CrcB -

Sequence

Protein


Download         Length: 743 a.a.        Molecular weight: 84165.31 Da        Isoelectric Point: 8.4747

>NTDB_id=975590 AAC899_RS14325 WP_151752748.1 3032244..3034475(+) (priA) [Acinetobacter soli strain HY24]
MHTTPPQPPQDIFRVRVAVPVHLYDTFDYSVSAADYEQAAIGARVLVSFGRQTLVGMITEKLAPDLPLDPRFQLKPIQAL
LDQSPILDQKVLKLLTWSAQYYQFPLGEVIQTALPGLLRQGKDEDILTHIWRIAAHPDPDAKLKRSLKQFEAYQILKLHP
AGTTETILNLSGVDTATLRALQKKELVTCTQEIQDFRPTPVQLAQMPLTANPDQQHAIERVMAHLHAYRAFLLDGLTGSG
KTEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTITRFKSRFHCDVALLHSGLNDSTRLQAWQQAKMGKASIILGTRSAIFT
PLPHLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIDSYHLVEQNKLELLELNQRAGVALMPKV
HLIDLKVAKKQHGLSQKLIEQIQHTLKRQEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTVHTQPYTYLHCHHCGT
IQRMPEACLACNHPTLKTLGMGTAKVEAHLTELFPEHDVIRVDRDSTSRVGSWQKIYDRIQQNKPMILLGTQMLAKGHHF
PFVTLVAILDIDAGLLSVDVRAPERTAQLIVQVSGRAGRGEHKGEVYLQTLRPDHPMLTTLIEKDYRAVAAEILNERRVA
LLPPYRYSVLIRCESKDREYSQAFLQQAAARFLQQAGSVAEIWGPIPAPMERKAGRYRAHMVILAQDRARLHFFLRSWWA
DTVQQPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2232 bp        

>NTDB_id=975590 AAC899_RS14325 WP_151752748.1 3032244..3034475(+) (priA) [Acinetobacter soli strain HY24]
ATGCACACTACGCCACCTCAGCCCCCTCAAGACATTTTCCGTGTTCGTGTGGCCGTTCCTGTGCATTTATACGATACCTT
CGACTATAGCGTAAGCGCAGCAGATTATGAACAGGCAGCGATCGGTGCACGCGTTTTAGTCTCGTTTGGCCGTCAGACAC
TGGTCGGTATGATTACTGAAAAACTGGCGCCTGATCTGCCACTCGATCCAAGATTTCAATTAAAACCGATTCAGGCTTTA
CTGGATCAATCACCGATCTTAGACCAGAAAGTTTTAAAATTATTGACATGGTCGGCGCAGTATTACCAATTTCCTCTAGG
CGAAGTGATTCAAACGGCATTACCCGGTTTGCTACGTCAAGGCAAGGACGAGGATATTCTGACGCACATCTGGCGCATCG
CGGCGCATCCCGACCCAGACGCAAAACTCAAGCGCTCGCTCAAACAGTTTGAAGCCTATCAAATTCTCAAGCTGCATCCA
GCCGGCACCACTGAGACCATTTTAAATTTAAGCGGCGTCGATACCGCGACCCTTCGGGCTTTACAAAAAAAAGAACTGGT
GACTTGCACACAGGAAATCCAAGATTTCCGTCCCACGCCGGTACAATTGGCACAAATGCCATTAACTGCCAACCCTGACC
AGCAACATGCCATTGAACGCGTTATGGCACATTTGCATGCCTACCGCGCTTTTTTACTCGATGGGCTAACCGGCAGCGGC
AAAACCGAAGTGTATTTGCACATCATGCACGAGGTGCTCAAGCAAGGTAAACAGGTGCTGGTGCTGGTGCCTGAAATTGG
TCTGACACCACAAACCATTACCCGATTCAAATCCCGATTTCACTGTGATGTCGCATTGCTGCATTCAGGTTTAAACGATT
CCACGCGCTTACAGGCTTGGCAACAGGCCAAAATGGGCAAAGCCTCAATTATTTTGGGCACGCGGTCTGCAATTTTCACC
CCTTTACCGCATTTGGGATTGATCATTTTAGATGAAGAGCATGATCTTTCTTTTAAGCAGCAAGAAGGCTTTCGCTATCA
TGCACGCGATGTGGCACTGTATCGTGCGCATCTGGAAAATTGTCCGATTATTCTTGGCTCTGCCACGCCCAGTATCGACA
GTTATCATCTGGTCGAACAAAATAAACTTGAATTACTTGAGTTAAATCAACGTGCTGGCGTGGCATTAATGCCTAAAGTA
CACTTGATCGACTTAAAAGTAGCCAAAAAGCAGCACGGATTGAGCCAAAAGCTGATCGAACAAATCCAGCACACCCTCAA
GCGCCAAGAACAAGTCCTGATTTTTTTAAACCGACGTGGCTATGCCCCCGTACTGGTCTGCGAAAGTTGCGGCTGGCAAG
CCAATTGTCCACATTGCGACGCACATTTTACCGTACATACCCAACCCTATACCTACCTGCACTGTCACCACTGTGGCACT
ATTCAGCGCATGCCAGAAGCGTGTTTGGCCTGCAATCACCCGACCTTAAAAACCTTGGGCATGGGCACTGCCAAAGTCGA
AGCGCATTTGACCGAACTCTTTCCTGAGCATGATGTGATTCGGGTTGATCGTGACAGTACCAGCCGAGTCGGCAGCTGGC
AAAAAATTTATGACCGAATCCAGCAAAACAAGCCGATGATCTTACTCGGAACTCAAATGCTGGCCAAAGGTCATCACTTT
CCGTTCGTGACCTTGGTGGCGATTTTAGATATCGATGCCGGCTTACTGAGTGTCGATGTCCGTGCGCCAGAACGCACCGC
TCAATTGATTGTTCAAGTTTCGGGACGGGCTGGTCGCGGTGAACATAAAGGCGAAGTGTATCTACAAACCCTGCGCCCCG
ATCATCCAATGCTAACAACGCTGATTGAAAAAGATTATCGTGCCGTTGCCGCCGAAATACTCAATGAACGTCGAGTGGCG
TTGTTGCCCCCTTATCGCTATAGCGTGTTGATCCGCTGTGAATCCAAAGATCGTGAATACAGTCAGGCGTTTTTACAACA
AGCCGCAGCACGTTTCTTACAACAGGCAGGCAGTGTGGCCGAGATCTGGGGGCCTATTCCCGCGCCAATGGAACGAAAAG
CAGGACGTTATCGGGCACATATGGTGATTTTGGCGCAAGACCGGGCGCGCTTACATTTCTTTTTACGTTCTTGGTGGGCC
GATACCGTACAGCAACCGCGCCAGCATCAATTACGGCTTTCGATTGATGTCGATCCGCAAGAATTTAGCTGA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(16-115)

Primosomal protein N C-terminal domain (PriA_C)

(644-739)

Type III restriction enzyme, res subunit (ResIII)

(211-371)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

77.733

99.731

0.775

Multiple sequence alignment