Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AAC899_RS10330 | Genome accession | NZ_CP151168 |
| Coordinates | 2185425..2185811 (-) | Length | 128 a.a. |
| NCBI ID | WP_004948134.1 | Uniprot ID | - |
| Organism | Acinetobacter soli strain HY24 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2180425..2190811
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAC899_RS10300 (AAC899_10300) | tadA | 2180652..2181164 (-) | 513 | WP_111811853.1 | tRNA adenosine(34) deaminase TadA | - |
| AAC899_RS10305 (AAC899_10305) | - | 2181170..2182294 (-) | 1125 | WP_004948124.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AAC899_RS10310 (AAC899_10310) | ung | 2182291..2183004 (-) | 714 | WP_004938711.1 | uracil-DNA glycosylase | - |
| AAC899_RS10315 (AAC899_10315) | - | 2183059..2183655 (-) | 597 | WP_025095495.1 | 6-carboxytetrahydropterin synthase | - |
| AAC899_RS10320 (AAC899_10320) | gspK | 2183820..2184788 (-) | 969 | WP_004948129.1 | type II secretion system minor pseudopilin GspK | - |
| AAC899_RS10325 (AAC899_10325) | xcpW | 2184805..2185428 (-) | 624 | WP_004938718.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AAC899_RS10330 (AAC899_10330) | xcpV | 2185425..2185811 (-) | 387 | WP_004948134.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AAC899_RS10335 (AAC899_10335) | - | 2185801..2186346 (-) | 546 | WP_004948137.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| AAC899_RS10340 (AAC899_10340) | - | 2186356..2186967 (-) | 612 | WP_004938726.1 | TetR/AcrR family transcriptional regulator | - |
| AAC899_RS10345 (AAC899_10345) | - | 2187006..2187779 (-) | 774 | WP_151745922.1 | TatD family hydrolase | - |
| AAC899_RS10350 (AAC899_10350) | - | 2187795..2188139 (-) | 345 | WP_004948143.1 | PilZ domain-containing protein | - |
| AAC899_RS10355 (AAC899_10355) | - | 2188142..2189128 (-) | 987 | WP_151745923.1 | DNA polymerase III subunit delta' | - |
| AAC899_RS10360 (AAC899_10360) | kdsB | 2189143..2189904 (-) | 762 | WP_111811839.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 128 a.a. Molecular weight: 14260.44 Da Isoelectric Point: 10.0033
>NTDB_id=975583 AAC899_RS10330 WP_004948134.1 2185425..2185811(-) (xcpV) [Acinetobacter soli strain HY24]
MKTKGFTLLEVMVALAIFATAAVALTKLGMQYTQSTANAVLRTKAQFVAMNEAAMMQINREWMQGTSSKQVTSQGETWQV
DKTAQATISPNVQRIEIQISRFDPQQNKVEAGITHMVFFNYPPKENVS
MKTKGFTLLEVMVALAIFATAAVALTKLGMQYTQSTANAVLRTKAQFVAMNEAAMMQINREWMQGTSSKQVTSQGETWQV
DKTAQATISPNVQRIEIQISRFDPQQNKVEAGITHMVFFNYPPKENVS
Nucleotide
Download Length: 387 bp
>NTDB_id=975583 AAC899_RS10330 WP_004948134.1 2185425..2185811(-) (xcpV) [Acinetobacter soli strain HY24]
ATGAAAACTAAAGGGTTTACATTATTAGAAGTGATGGTGGCGCTCGCGATTTTTGCAACCGCTGCAGTGGCCTTGACCAA
GCTCGGTATGCAGTATACTCAGTCTACAGCCAATGCCGTATTAAGAACCAAAGCACAATTCGTGGCAATGAACGAAGCCG
CCATGATGCAAATTAATCGTGAATGGATGCAAGGCACATCCTCAAAGCAAGTGACGTCTCAGGGTGAAACGTGGCAAGTC
GATAAAACTGCGCAGGCGACGATTAGCCCAAACGTACAGCGGATTGAAATTCAGATCAGCCGCTTTGATCCTCAGCAAAA
CAAAGTTGAAGCGGGAATTACGCATATGGTGTTTTTCAATTATCCGCCTAAAGAAAACGTCTCATGA
ATGAAAACTAAAGGGTTTACATTATTAGAAGTGATGGTGGCGCTCGCGATTTTTGCAACCGCTGCAGTGGCCTTGACCAA
GCTCGGTATGCAGTATACTCAGTCTACAGCCAATGCCGTATTAAGAACCAAAGCACAATTCGTGGCAATGAACGAAGCCG
CCATGATGCAAATTAATCGTGAATGGATGCAAGGCACATCCTCAAAGCAAGTGACGTCTCAGGGTGAAACGTGGCAAGTC
GATAAAACTGCGCAGGCGACGATTAGCCCAAACGTACAGCGGATTGAAATTCAGATCAGCCGCTTTGATCCTCAGCAAAA
CAAAGTTGAAGCGGGAATTACGCATATGGTGTTTTTCAATTATCCGCCTAAAGAAAACGTCTCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
79.032 |
96.875 |
0.766 |