Detailed information NTG0975582

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AAC899_RS10325
• Genome accession: NZ_CP151168
• Coordinates: 2184805..2185428 (-)
• Length: 207 a.a.
• NCBI ID: WP_004938718.1
• Uniprot ID: A0A1P8EFN6
• Organism: Acinetobacter soli strain HY24
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2179805..2190428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAC899_RS10295 (AAC899_10295)	-	2180117..2180551 (-)	435	WP_111811855.1	SRPBCC family protein	-
AAC899_RS10300 (AAC899_10300)	tadA	2180652..2181164 (-)	513	WP_111811853.1	tRNA adenosine(34) deaminase TadA	-
AAC899_RS10305 (AAC899_10305)	-	2181170..2182294 (-)	1125	WP_004948124.1	enoyl-CoA hydratase/isomerase family protein	-
AAC899_RS10310 (AAC899_10310)	ung	2182291..2183004 (-)	714	WP_004938711.1	uracil-DNA glycosylase	-
AAC899_RS10315 (AAC899_10315)	-	2183059..2183655 (-)	597	WP_025095495.1	6-carboxytetrahydropterin synthase	-
AAC899_RS10320 (AAC899_10320)	gspK	2183820..2184788 (-)	969	WP_004948129.1	type II secretion system minor pseudopilin GspK	-
AAC899_RS10325 (AAC899_10325)	xcpW	2184805..2185428 (-)	624	WP_004938718.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AAC899_RS10330 (AAC899_10330)	xcpV	2185425..2185811 (-)	387	WP_004948134.1	type II secretion system minor pseudopilin GspI	Machinery gene
AAC899_RS10335 (AAC899_10335)	-	2185801..2186346 (-)	546	WP_004948137.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
AAC899_RS10340 (AAC899_10340)	-	2186356..2186967 (-)	612	WP_004938726.1	TetR/AcrR family transcriptional regulator	-
AAC899_RS10345 (AAC899_10345)	-	2187006..2187779 (-)	774	WP_151745922.1	TatD family hydrolase	-
AAC899_RS10350 (AAC899_10350)	-	2187795..2188139 (-)	345	WP_004948143.1	PilZ domain-containing protein	-
AAC899_RS10355 (AAC899_10355)	-	2188142..2189128 (-)	987	WP_151745923.1	DNA polymerase III subunit delta'	-
AAC899_RS10360 (AAC899_10360)	kdsB	2189143..2189904 (-)	762	WP_111811839.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 207 a.a.
• Molecular weight: 23793.43 Da
• Isoelectric Point: 8.2901

>NTDB_id=975582 AAC899_RS10325 WP_004938718.1 2184805..2185428(-) (xcpW) [Acinetobacter soli strain HY24]
MKKRSGFTLVELLVAIAIFAVLSALGWKIFDYLIKTKERNQQHELQIFELQDAYQIILRDSLQLIPMTANINGQIRPALS
LSDTSLQFSKAGVSDPLKEGLAPYERIEYRYVPSEKMVYRLKYRSLNITNNEQPESSVLLKNVDQFRITVLNPQILNQWP
EAGADLSQPTSMQRLPRGLKIDVQRSDVNYEWIFPLLDTQFMSVNGS

Nucleotide

• Length: 624 bp

>NTDB_id=975582 AAC899_RS10325 WP_004938718.1 2184805..2185428(-) (xcpW) [Acinetobacter soli strain HY24]
ATGAAAAAAAGATCGGGATTTACGCTGGTTGAGCTCTTGGTGGCGATTGCGATTTTTGCGGTTCTTTCTGCATTGGGCTG
GAAAATTTTTGACTATCTGATTAAGACCAAGGAACGCAACCAGCAACATGAGCTTCAGATTTTTGAGTTGCAAGATGCCT
ATCAAATTATACTTCGAGATTCACTTCAGCTCATCCCGATGACGGCGAATATCAACGGACAAATCCGGCCTGCACTCAGC
CTGAGTGATACCAGTTTGCAATTTAGCAAGGCAGGAGTGAGTGATCCGCTCAAAGAGGGCCTCGCGCCATACGAGCGTAT
TGAATATCGTTATGTACCCAGTGAAAAGATGGTATATCGGTTGAAATACCGTAGCCTGAATATCACCAACAACGAGCAGC
CAGAATCGAGTGTACTGCTCAAAAATGTAGATCAATTTCGAATAACCGTGTTGAATCCGCAGATACTCAACCAGTGGCCT
GAGGCGGGTGCAGATTTAAGTCAGCCTACCAGCATGCAGCGCCTGCCGCGAGGGCTTAAGATTGATGTACAGCGTTCAGA
TGTAAACTATGAATGGATCTTTCCGCTTTTAGATACTCAATTTATGAGTGTAAACGGATCATAG

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-192)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

3D structure

• AlphaFold DB: A0A1P8EFN6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	60.204	94.686	0.57