Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilX   Type   Machinery gene
Locus tag   AAC899_RS01445 Genome accession   NZ_CP151168
Coordinates   331250..331918 (+) Length   222 a.a.
NCBI ID   WP_025095721.1    Uniprot ID   A0A0M1I8F0
Organism   Acinetobacter soli strain HY24     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 326250..336918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC899_RS01415 (AAC899_01415) rpoZ 327125..327406 (-) 282 WP_004934284.1 DNA-directed RNA polymerase subunit omega -
  AAC899_RS01420 (AAC899_01420) gmk 327475..328098 (-) 624 WP_004945015.1 guanylate kinase -
  AAC899_RS01425 (AAC899_01425) ispH 328234..329184 (+) 951 WP_004934289.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  AAC899_RS01430 (AAC899_01430) - 329305..329751 (+) 447 WP_111811938.1 GspH/FimT family pseudopilin -
  AAC899_RS01435 (AAC899_01435) pilV 329748..330284 (+) 537 WP_025095723.1 type IV pilus modification protein PilV Machinery gene
  AAC899_RS01440 (AAC899_01440) comB 330285..331253 (+) 969 WP_025095722.1 PilW family protein Machinery gene
  AAC899_RS01445 (AAC899_01445) pilX 331250..331918 (+) 669 WP_025095721.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  AAC899_RS01450 (AAC899_01450) comC 331936..336297 (+) 4362 WP_343316464.1 PilC/PilY family type IV pilus protein Machinery gene
  AAC899_RS01455 (AAC899_01455) comE 336363..336836 (+) 474 WP_119689994.1 type IV pilin protein Machinery gene

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 23808.13 Da        Isoelectric Point: 8.4716

>NTDB_id=975567 AAC899_RS01445 WP_025095721.1 331250..331918(+) (pilX) [Acinetobacter soli strain HY24]
MKTNQQGATLIVVLMILLLIMVVGTLAIRQSVSSLKMVANNQIQALLLQNSDAALMYFQNPVNTSTLASANGVVNYFRNV
GNLNQEMVSCFNKTAPFVMSNMGVVNSSGTVDNQASCKSTDAAGGRTQVVTQVYIKKAASSDNQPFADYARGTDITTAKT
ESSLRLQLTSVSVMTGFSSAEDINTCLNKSASSAISCLSQKQALFNSQVAEYRFLSDFEPPK

Nucleotide


Download         Length: 669 bp        

>NTDB_id=975567 AAC899_RS01445 WP_025095721.1 331250..331918(+) (pilX) [Acinetobacter soli strain HY24]
ATGAAAACCAATCAACAAGGTGCAACCCTGATCGTGGTGCTGATGATTTTACTCTTGATCATGGTGGTGGGAACTTTGGC
CATCCGACAAAGTGTCAGCTCGCTCAAAATGGTTGCAAATAATCAGATTCAGGCTTTATTGCTACAAAATTCGGATGCTG
CCCTGATGTATTTCCAAAATCCTGTGAATACTAGCACCTTGGCTTCTGCAAATGGTGTCGTTAATTATTTTCGTAATGTC
GGTAATCTTAATCAGGAAATGGTGAGCTGCTTTAATAAGACAGCGCCGTTTGTGATGAGCAATATGGGTGTGGTCAATAG
TTCAGGCACGGTCGATAACCAAGCCTCATGTAAAAGTACCGATGCTGCGGGTGGGCGCACGCAGGTGGTCACACAGGTGT
ATATCAAAAAGGCAGCATCATCGGACAATCAGCCATTTGCTGACTATGCGCGTGGTACCGATATTACCACTGCAAAAACG
GAAAGCAGTTTACGCCTACAACTGACTTCAGTTTCTGTCATGACCGGATTTTCATCTGCCGAAGATATCAATACCTGTTT
GAATAAATCGGCCAGCAGTGCCATCAGTTGTTTGAGTCAGAAGCAGGCCTTGTTTAATTCACAAGTGGCCGAGTATCGCT
TCTTATCTGACTTTGAGCCACCTAAGTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M1I8F0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilX Acinetobacter baylyi ADP1

78.829

100

0.788

Multiple sequence alignment