Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   UXQ47_RS05830 Genome accession   NZ_CP151144
Coordinates   1196607..1197479 (+) Length   290 a.a.
NCBI ID   WP_341532547.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN151     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1191607..1202479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXQ47_RS05810 (UXQ47_05810) sucC 1191721..1192887 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  UXQ47_RS05815 (UXQ47_05815) sucD 1192909..1193817 (+) 909 WP_000110251.1 succinate--CoA ligase subunit alpha -
  UXQ47_RS05820 (UXQ47_05820) - 1194044..1195162 (+) 1119 WP_001041669.1 LysM peptidoglycan-binding domain-containing protein -
  UXQ47_RS05825 (UXQ47_05825) fmhC 1195190..1196434 (+) 1245 WP_064140156.1 FemA/FemB family glycyltransferase FmhC -
  UXQ47_RS05830 (UXQ47_05830) dprA 1196607..1197479 (+) 873 WP_341532547.1 DNA-processing protein DprA Machinery gene
  UXQ47_RS05835 (UXQ47_05835) topA 1197653..1199728 (+) 2076 WP_001557331.1 type I DNA topoisomerase -
  UXQ47_RS05840 (UXQ47_05840) trmFO 1199884..1201191 (+) 1308 WP_000195258.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33548.93 Da        Isoelectric Point: 9.5960

>NTDB_id=975344 UXQ47_RS05830 WP_341532547.1 1196607..1197479(+) (dprA) [Staphylococcus aureus strain BSN151]
MIKLFLLKLYWAHFSTKQIHQFLMAYPNVIKEEGRKKDSYLSEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDSEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=975344 UXQ47_RS05830 WP_341532547.1 1196607..1197479(+) (dprA) [Staphylococcus aureus strain BSN151]
TTGATTAAACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGAGGGAAGAAAAAAAGATAGTTATTTAAGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATTCTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATTGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

99.655

100

0.997
  dprA Staphylococcus aureus N315

99.31

100

0.993

Multiple sequence alignment