Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   UXQ36_RS04515 Genome accession   NZ_CP151115
Coordinates   945254..946240 (+) Length   328 a.a.
NCBI ID   WP_341514672.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN183     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 940254..951240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXQ36_RS04490 (UXQ36_04490) trpS 940845..941834 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  UXQ36_RS04495 (UXQ36_04495) spxA 942128..942523 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  UXQ36_RS04500 (UXQ36_04500) - 942713..942784 (-) 72 Protein_875 hypothetical protein -
  UXQ36_RS04505 (UXQ36_04505) - 942787..944106 (-) 1320 WP_001557163.1 ISL3-like element IS1181 family transposase -
  UXQ36_RS04510 (UXQ36_04510) mecA 944414..945133 (+) 720 WP_001217728.1 adaptor protein MecA -
  UXQ36_RS04515 (UXQ36_04515) coiA 945254..946240 (+) 987 WP_341514672.1 competence protein CoiA family protein Machinery gene
  UXQ36_RS04520 (UXQ36_04520) pepF 946288..948096 (+) 1809 WP_000082733.1 oligoendopeptidase F -
  UXQ36_RS04525 (UXQ36_04525) yjbH 948556..949362 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  UXQ36_RS04530 (UXQ36_04530) - 949385..949750 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  UXQ36_RS04535 (UXQ36_04535) - 949854..950447 (-) 594 WP_000224619.1 CYTH domain-containing protein -
  UXQ36_RS04540 (UXQ36_04540) - 950633..950980 (+) 348 WP_001242103.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38851.52 Da        Isoelectric Point: 9.5714

>NTDB_id=974961 UXQ36_RS04515 WP_341514672.1 945254..946240(+) (coiA) [Staphylococcus aureus strain BSN183]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDSLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=974961 UXQ36_RS04515 WP_341514672.1 945254..946240(+) (coiA) [Staphylococcus aureus strain BSN183]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAGTCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

99.695

100

0.997
  coiA Staphylococcus aureus MW2

97.256

100

0.973

Multiple sequence alignment