Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   UXQ49_RS07850 Genome accession   NZ_CP151113
Coordinates   1618244..1618930 (-) Length   228 a.a.
NCBI ID   WP_072468915.1    Uniprot ID   A0A5F0HFN7
Organism   Staphylococcus aureus strain BSN165     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1613244..1623930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXQ49_RS07830 (UXQ49_07830) rpsT 1614158..1614409 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  UXQ49_RS07835 (UXQ49_07835) holA 1614454..1615428 (-) 975 WP_001282573.1 DNA polymerase III subunit delta -
  UXQ49_RS07840 (UXQ49_07840) comEC 1615485..1617686 (-) 2202 WP_001622275.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  UXQ49_RS07845 (UXQ49_07845) - 1617691..1618152 (-) 462 WP_000439693.1 ComE operon protein 2 -
  UXQ49_RS07850 (UXQ49_07850) comEA 1618244..1618930 (-) 687 WP_072468915.1 ComEA family DNA-binding protein Machinery gene
  UXQ49_RS07855 (UXQ49_07855) - 1618970..1619686 (-) 717 WP_000084840.1 class I SAM-dependent methyltransferase -
  UXQ49_RS07860 (UXQ49_07860) rsfS 1619689..1620042 (-) 354 WP_001088020.1 ribosome silencing factor -
  UXQ49_RS07865 (UXQ49_07865) yqeK 1620043..1620627 (-) 585 WP_001017837.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  UXQ49_RS07870 (UXQ49_07870) nadD 1620617..1621186 (-) 570 WP_000725165.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  UXQ49_RS07875 (UXQ49_07875) yhbY 1621189..1621479 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  UXQ49_RS07880 (UXQ49_07880) aroE 1621483..1622289 (-) 807 WP_000666750.1 shikimate dehydrogenase -
  UXQ49_RS07885 (UXQ49_07885) yqeH 1622303..1623403 (-) 1101 WP_001280146.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25812.41 Da        Isoelectric Point: 9.3305

>NTDB_id=974932 UXQ49_RS07850 WP_072468915.1 1618244..1618930(-) (comEA) [Staphylococcus aureus strain BSN165]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQAKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGENSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=974932 UXQ49_RS07850 WP_072468915.1 1618244..1618930(-) (comEA) [Staphylococcus aureus strain BSN165]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGCCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACACCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGAAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5F0HFN7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961

Multiple sequence alignment